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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_6365.1_38321
Locus scaffold6365.1 : 1 ... 17453 : +
To GenomeBrowser scaffold6365.1:1..17453
Genes list of scaffold scaffold6365.1
Synonym pfu_aug2.0_2409.1_32182

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_6365.1_38321.t1 1 1 7tm_1 37 302 9.6e-17 60.9 8.2e-21 1.2e-16 60.6

Transcript
Transcript IDpfu_aug1.0_6365.1_38321.t1
Definition-
>pfu_aug1.0_6365.1_38321.t1
attcagaagaatttttcaatcatccggatccttctagcattacatatcttgccagaaagatattcattcctataatatgt
ctatttggacttgccggcaacattatgtcggcagttatctactttgggaaagaaatgcgtaaaatgtcatgcagcatcta
cctcggcgcacggtccgtgtctgacacagggtacatcatcacattactatgtagctggctggactttgtggacattcgta
tcgttcatctaccaggattatgtcagttaacgatcttcatgtcttatgtctgcagcttcatgtccatctggtgcgttgtc
ttcgtgacgtacgaaaatttcgttcgaatttgtaagcatgataaggtgacgtccgtctgtacagtaaaagtagcgaggta
tgccactctggcattgcttgcattcgctgtactgacctacaactttcacctatggggagtggacaccagagagatctacg
ggaagtcatattgcatgacgagacacattgagatatttacaaagatagaaatggctgttgtattcggagatacattactg
acattgatcattcctttggtcattataatgatcttcatgagtctcatcttcaaaaaggcgtattcttcatggcaacgctt
tactagaagggaagaggatcgtcagcagaacatgttcctggacagacatagatcatcagcttcacctcactccagagtag
ccaaacttctcacaacggtttctgttctgttcgtaatcctacatactccaagtcacgtgatgaggataaaagaaatattc
gaagcattcttcctgggagttgttgctagcagtgacggagaccgcgttctccaacacatattctctgtcctttactacat
gaacttcgcgatcaactggttcgtatacatcatcagcggcaaaaagttcagacgtgtgttctactataagttcataaaat
gtaaaacaagatcacaaagagattcctgcttgaccagccagatgaacacaagaacggacactaggcttggtacttgtcca
atctacgacttgtacgagtgcattcttaaaacttgcactctgactgactgtgacgacgggactccatgtatggccctgtc
caatcctctttag

Protein
Protein IDpfu_aug1.0_6365.1_38321.t1
Definition-
>pfu_aug1.0_6365.1_38321.t1
SEEFFNHPDPSSITYLARKIFIPIICLFGLAGNIMSAVIYFGKEMRKMSCSIYLGARSVSDTGYIITLLCSWLDFVDIRI
VHLPGLCQLTIFMSYVCSFMSIWCVVFVTYENFVRICKHDKVTSVCTVKVARYATLALLAFAVLTYNFHLWGVDTREIYG
KSYCMTRHIEIFTKIEMAVVFGDTLLTLIIPLVIIMIFMSLIFKKAYSSWQRFTRREEDRQQNMFLDRHRSSASPHSRVA
KLLTTVSVLFVILHTPSHVMRIKEIFEAFFLGVVASSDGDRVLQHIFSVLYYMNFAINWFVYIISGKKFRRVFYYKFIKC
KTRSQRDSCLTSQMNTRTDTRLGTCPIYDLYECILKTCTLTDCDDGTPCMALSNPL

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