Gene
| Gene Model ID | pfu_aug1.0_6367.1_31180 |
|---|---|
| Locus | scaffold6367.1 : 2846 ... 13157 : + |
| To GenomeBrowser | scaffold6367.1:2846..13157 |
| Genes list of scaffold | scaffold6367.1 |
| Synonym | pfu_aug2.0_445.1_17432 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6367.1_31180.t1 | 2 | 1 | Voldacs | 7 | 80 | 1.6e-13 | 50.6 | 1.1e-17 | 1.6e-13 | 50.6 |
| pfu_aug1.0_6367.1_31180.t1 | 2 | 2 | Voldacs | 110 | 120 | 1.6e-13 | 50.6 | 0.066 | 990.0 | -0.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_6367.1_31180.t1 | gi|291243235|ref|XP_002741509.1| | PREDICTED: methylosome subunit pICln-like [Saccoglossus kowalevskii] | 8.0e-15 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_6367.1_31180.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6367.1_31180.t1 atggtagatgggaagctagatagtgaagttcgtaggggcagcgagtcgtctgaggaagaatcaggctatgatgaaccaac ttcagaagtccgatttattcctactgacaaaggggcattggatgccatgttcagtgctatgtcagactgccaagctctac atcctgatgaacaagatacagactctgatgctgaagattttgaagctaattattacgagggtgaggagggtgtagaggaa ttatcagaacaaggtcagcgaacgttacaacatctagagaacttactaatcaatggtcaaggagatggtcagccatctac aacagatcaacaaaatggagacacagatgaaaggtttgaagatgctgacaacatggaacattaa |
|
Protein
| Protein ID | pfu_aug1.0_6367.1_31180.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6367.1_31180.t1 MVDGKLDSEVRRGSESSEEESGYDEPTSEVRFIPTDKGALDAMFSAMSDCQALHPDEQDTDSDAEDFEANYYEGEEGVEE LSEQGQRTLQHLENLLINGQGDGQPSTTDQQNGDTDERFEDADNMEH |
|