Gene
| Gene Model ID | pfu_aug1.0_6367.1_31181 |
|---|---|
| Locus | scaffold6367.1 : 14186 ... 34725 : - |
| To GenomeBrowser | scaffold6367.1:14186..34725 |
| Genes list of scaffold | scaffold6367.1 |
| Synonym | pfu_aug2.0_445.1_17433 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6367.1_31181.t1 | 1 | 1 | JmjC | 517 | 625 | 1.2e-32 | 112.4 | 6.7e-36 | 1.2e-32 | 112.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_6367.1_31181.t1 | gi|241735977|ref|XP_002413969.1| | histone demethylase, putative [Ixodes scapularis] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 4 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_6367.1_31181.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6367.1_31181.t1 atgtttccggctttttgtactggatacgaaagtgcattgaactggatacgaaaggttgaaaaaatcgtttaggcgacacg agcctttcagcaagttttgtacctagaaccgggttttagcagggcaaacgagattcatatacgacttggtttgatgtgca aagccacaaacaactatgacgccagtctcaagcattttcgacaggcactgaacgattcaagcgagtgttctttcagcaaa gcgcagattcgtctgcacattgcccatcttctagaagtacagccggcgtcggagcccctggacctcccgccccctccacc acagctgacacctcaacagatgaatctacttcaccagttacagcagaaccaggcgtcgttagatccccaacagagacagg tgcttgacaaccttagacaacaagtactattacagaatcagtaccaaatgaaggtacaacaacaacaaaaggagggagca tttcccctgtctcagggggacaggatgcctccacccttccttccaggaggcctgttacccccaggtcagagaacagactc gctcaactctatgccttctttgtcctctgtgacgttaaaccatcagggacacattccaggggtgatgtctgtagcatcat cagctcagggaggtactttaccactgtcatcatcatcacatcatgacagcctggacaggatcggagacacagcgacaagc gataccgaaggactgccaaaagaaattcaaaaatttgtttccgatcacttgaatgatagggatttaaatgctcttgacta tgctacctctattgctgaagacttactttctcagtttacacaaagtcagaacactagcaaatctgaggtgaactctcaac agaatgtgcattctagtcaaaaagagaagtccttatctaacagtggggataattcattaccgacatcccacgctagtccc agcaaactttcgtccagtgtacattccatgaattctcaggagacaagtcgtaccgaacctagaatagaccccaccaaagt ggaatatagtgtcaagtgtgatagtgaaaatgtgaataagcttgtcatatctcggaatataccaaggagtctaacacctc ctaatgcacctttcaacatatccattaccatgaagggcagagaagttttagcagcttgtaaaggctatggtaaaagagga ataacgacaagtttacttggagataaaggtcccccacgaccccctagtccaccctatccaccactggccaaggaaaatct caacccaccaacacccagtgtatatgaggagagtgaacgtgcaaggggaatacacaaagactcagatagtgattccaatt catcagggggtcctaaagggaaaaagaagaagacgatcaaatttggtacaaatgtggacctttctgatgagaagaagtgg aagactcagctgcaggagttgtctaaattacccgcgtttactcgagtagtgtcggcgagtaacctactgagtcatgtagg gaacactatactgggaatgaataccgtacaactctatatgaaagttccaggatcaagaacaccaggacatcaggaaaaca acaatttttgctcaatcaacatcaacataggccctggggactgtgaatggtttggtgtaccagaatcgtactggggagtc attcataatatgtgtgaaaggaataacatcaactacctaactgggtcatggtggcctattttagaggatttatatgagga aaatgtgcctgtttacaggtttatacagaaacctggggatctcgtgtgggtgggacctggtacaatacattgggtacaag ctgtgggatggtgtaataacatagcatggaacgttggtccagtgaatgccaggcagtttcagttggccttggaacggtac gagtggaacaagttacagagctataaatctattgtccctatgatccatttgtcgtggaacattgctagacatattaatat agctgaaccaaagctgtttgaacaaatcaagtcttgtttgatgaggtcgttgcgacagattcgctttacgttggatttta ttgaagagatgggactggaggtaaaatggcatggaaggtctgaaaacgaggcagcacactattgtaacgattgtagagta tttgacctgctgtttgtggtggagcaggataagaagtttgtcgtgcactgtcaggaatgtgcccgtaaaatcagtaccag gatggaggggtttgttgtgcttgaacagtaccaactagcagaactctgtgaaatatacgataggtttcaactctcacata tggttccatctagctga |
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Protein
| Protein ID | pfu_aug1.0_6367.1_31181.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6367.1_31181.t1 MFPAFCTGYESALNWIRKVEKIVXATRAFQQVLYLEPGFSRANEIHIRLGLMCKATNNYDASLKHFRQALNDSSECSFSK AQIRLHIAHLLEVQPASEPLDLPPPPPQLTPQQMNLLHQLQQNQASLDPQQRQVLDNLRQQVLLQNQYQMKVQQQQKEGA FPLSQGDRMPPPFLPGGLLPPGQRTDSLNSMPSLSSVTLNHQGHIPGVMSVASSAQGGTLPLSSSSHHDSLDRIGDTATS DTEGLPKEIQKFVSDHLNDRDLNALDYATSIAEDLLSQFTQSQNTSKSEVNSQQNVHSSQKEKSLSNSGDNSLPTSHASP SKLSSSVHSMNSQETSRTEPRIDPTKVEYSVKCDSENVNKLVISRNIPRSLTPPNAPFNISITMKGREVLAACKGYGKRG ITTSLLGDKGPPRPPSPPYPPLAKENLNPPTPSVYEESERARGIHKDSDSDSNSSGGPKGKKKKTIKFGTNVDLSDEKKW KTQLQELSKLPAFTRVVSASNLLSHVGNTILGMNTVQLYMKVPGSRTPGHQENNNFCSININIGPGDCEWFGVPESYWGV IHNMCERNNINYLTGSWWPILEDLYEENVPVYRFIQKPGDLVWVGPGTIHWVQAVGWCNNIAWNVGPVNARQFQLALERY EWNKLQSYKSIVPMIHLSWNIARHINIAEPKLFEQIKSCLMRSLRQIRFTLDFIEEMGLEVKWHGRSENEAAHYCNDCRV FDLLFVVEQDKKFVVHCQECARKISTRMEGFVVLEQYQLAELCEIYDRFQLSHMVPSS |
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