Gene
| Gene Model ID | pfu_aug1.0_6385.1_16912 |
|---|---|
| Locus | scaffold6385.1 : 23626 ... 42490 : + |
| To GenomeBrowser | scaffold6385.1:23626..42490 |
| Genes list of scaffold | scaffold6385.1 |
| Synonym | pfu_aug2.0_1125.1_18112 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6385.1_16912.t1 | 3 | 1 | DUF1115 | 53 | 53 | 3.6e-38 | 130.1 | 0.67 | 3300.0 | -2.4 |
| pfu_aug1.0_6385.1_16912.t1 | 1 | 1 | PRP3 | 250 | 307 | 6.8e-18 | 64.8 | 1.4e-21 | 6.8e-18 | 64.8 |
| pfu_aug1.0_6385.1_16912.t1 | 3 | 2 | DUF1115 | 295 | 319 | 3.6e-38 | 130.1 | 0.95 | 4700.0 | -2.9 |
| pfu_aug1.0_6385.1_16912.t1 | 3 | 3 | DUF1115 | 328 | 461 | 3.6e-38 | 130.1 | 7.19987e-42 | 3.6e-38 | 130.1 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_6385.1_16912.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6385.1_16912.t1 atgggatgtaaattagaagtgatattagacgacaagcaagctgaaaggtttgctgataagttatttgatgtgtgggagga ttacagactggacacaaggaatcagcgaaaaaagagaaaggatggagagagggacagagaacgcgaggaatccacagata agaagaaaaggaggtttgtggatgacaccagtgtgccccttcccgtggtacctggtccaggaaatcccagccctggacaa cttactggagataagatcaaggaaatgatggccaatgcacaaaaaatgatccaggaaaggaaagctcagctcacacatgt tataccacctaagcctcagttgtcccataacgagatgctgatgaacgatgccttggagaaagtcagacgagcccaggagc ttcaggccagaatacagagtaaaatgtcaggaatggggccgggagttgccttaactccccttatagctactaaagatgat ggtacagggtcaaaaccaactccacttattctggatgaggagggtagaaccatcgacataaaaacaggacaagctgtaca gctaaaacatcatacccctacactcaaggcaaacatcagggcaaagcgccgggcggagtttaagggtttgattgataaac cccccatggaggatatcggagagagtagatactttgatcccagggtcaggaacccttggatgacgaatttacatactgac gaaatggtcatttttaacaaattgacgaaaattggtactgacgaaaataaagcaatttacattcggatggccaacttaat gagggttttagggacagaggctgttcaggatcccacaaaagttgaggcacatgttagagcacagatggcaaaacgacaaa aagctcacgaagaagcaaatgctgcaaggaaattaacaaaagagcagagaagtgaaaaacgtgccaaaaaaataaaggaa gatacctcgctaggagtacatatatcagtctatagattaagagatatatcaaacccagcaaagaagtttaaagtagaaac caatgccaagcagctgttcatgacgggaattgtagtgatacatagagactgtaatgtagttgtggtggaggggggtccta aacaacagaaaaagttccgcagattgatgctgcatcgaattaagtggaatgaagacaaacagaaaaagtctgtcaaagta gatgatgatgacagtgattcagaagaagagtcagacaagggaaatagatgtgtacttgtatgggagggtacagcaaagag tcgagcatttggtgatgttaaattcaaaatgtgtcccactgaagcatttgcaagagaacagtttaaaaagtgtggagtgg aacagtactgggacttggcatttagtggtgcagtgttagaatcaacaggggatgatttttga |
|
Protein
| Protein ID | pfu_aug1.0_6385.1_16912.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6385.1_16912.t1 MGCKLEVILDDKQAERFADKLFDVWEDYRLDTRNQRKKRKDGERDREREESTDKKKRRFVDDTSVPLPVVPGPGNPSPGQ LTGDKIKEMMANAQKMIQERKAQLTHVIPPKPQLSHNEMLMNDALEKVRRAQELQARIQSKMSGMGPGVALTPLIATKDD GTGSKPTPLILDEEGRTIDIKTGQAVQLKHHTPTLKANIRAKRRAEFKGLIDKPPMEDIGESRYFDPRVRNPWMTNLHTD EMVIFNKLTKIGTDENKAIYIRMANLMRVLGTEAVQDPTKVEAHVRAQMAKRQKAHEEANAARKLTKEQRSEKRAKKIKE DTSLGVHISVYRLRDISNPAKKFKVETNAKQLFMTGIVVIHRDCNVVVVEGGPKQQKKFRRLMLHRIKWNEDKQKKSVKV DDDDSDSEEESDKGNRCVLVWEGTAKSRAFGDVKFKMCPTEAFAREQFKKCGVEQYWDLAFSGAVLESTGDDF |
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