Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_63997.1_20352
Locus scaffold63997.1 : 1 ... 3872 : -
To GenomeBrowser scaffold63997.1:1..3872
Genes list of scaffold scaffold63997.1
Synonym pfu_aug2.0_464.1_14183

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_63997.1_20352.t1 1 1 SPRY 1 82 1.3e-06 28.4 2.2e-10 3.3e-06 27.2

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_63997.1_20352.t1 gi|340374453|ref|XP_003385752.1| PREDICTED: SPRY domain-containing protein 3-like [Amphimedon queenslandica] 1.0e-18

Transcript
Transcript IDpfu_aug1.0_63997.1_20352.t1
Definition-
>pfu_aug1.0_63997.1_20352.t1
gggttgggctggtgccatccaactatccaagatatagacaaccaggatgggaacaatcatccgttggcttccatgcagat
gatggacacctatatctttctgctggttatggcgacgaattcggtccgacatccactactggggatacgataggctgtgg
catagaatttccaacagatgctgacaaagatgaaatcgtaaatctccagcatgttgaggtcttcttcactcataatggaa
aaaagggccctgtaaagtgcgaaacgaaaagaaaacgaaacaaaacaaaacaaatcgaaacgaaacgaaacaaatcgaaa
cgaaacgaaactaaacaaaacaaaacataa

Protein
Protein IDpfu_aug1.0_63997.1_20352.t1
Definition-
>pfu_aug1.0_63997.1_20352.t1
VGLVPSNYPRYRQPGWEQSSVGFHADDGHLYLSAGYGDEFGPTSTTGDTIGCGIEFPTDADKDEIVNLQHVEVFFTHNGK
KGPVKCETKRKRNKTKQIETKRNKSKRNETKQNKT

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495