Gene
| Gene Model ID | pfu_aug1.0_6403.1_16920 |
|---|---|
| Locus | scaffold6403.1 : 45196 ... 59153 : + |
| To GenomeBrowser | scaffold6403.1:45196..59153 |
| Genes list of scaffold | scaffold6403.1 |
| Synonym | pfu_aug2.0_666.1_21037 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6403.1_16920.t1 | 2 | 1 | Flavodoxin_2 | 4 | 139 | 4.0e-35 | 121.1 | 2.4e-38 | 1.2e-34 | 119.6 |
| pfu_aug1.0_6403.1_16920.t1 | 2 | 1 | FMN_red | 5 | 121 | 4.3e-09 | 36.0 | 2.5e-12 | 1.2e-08 | 34.5 |
| pfu_aug1.0_6403.1_16920.t1 | 2 | 2 | FMN_red | 148 | 182 | 4.3e-09 | 36.0 | 0.44 | 2200.0 | -2.0 |
| pfu_aug1.0_6403.1_16920.t1 | 2 | 2 | Flavodoxin_2 | 188 | 215 | 4.0e-35 | 121.1 | 0.26 | 1300.0 | -1.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_6403.1_16920.t1 | gi|50734103|ref|XP_418973.1| | PREDICTED: ribosyldihydronicotinamide dehydrogenase [quinone] isoform X1 [Gallus gallus] | 2.0e-32 |
Transcript
| Transcript ID | pfu_aug1.0_6403.1_16920.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6403.1_16920.t1 atggcaaagaaaaatatattgatcgtatatgcacatcaaaatccgcacacatcattcaacgctgctcttaaggatgaggc gattaaagttttgatagatgatggacacaatgtgcaagtttccgatctttatagccaaaactgggatccaagagccacaa taagtgacttcgaaggttcactaccacattctgaattgtccaattgctttaatgaacagtcgtatgcaacgaaacaaggg acaacgtcaaagatcatacaggccgaacagaagaagcttaaggaagccgaccttgttattttccagtttcctgtctactg gttttctgtcccagcgatcctaaaaggctggtttgataaagtatttgcagaaggcataacgcatggttttccggataatg tttatgagaacggacttatgaaggcctctcatgaaacggaaagtgaaagtagatatactttcactttctgtgaactgact ggcgagcgtagcgagtcggaaaattttagatatgaagtattcaatttgttaaaattcagtcatccatacatgtatataca acttttatctatattgacgagcggagcgagccgtacattttttggaatagatggttacaggaaagaaagctatgctttct cttacgactggagcgacacaagaaatgtattcagcaagtggaaatcatggagacatgaatatgataatgtggccgataca ggtaacgataaagcatcaacaagacggcgtaacaacgggaaatccgacatttccggttctaaacgagacgattcgctttg a |
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Protein
| Protein ID | pfu_aug1.0_6403.1_16920.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6403.1_16920.t1 MAKKNILIVYAHQNPHTSFNAALKDEAIKVLIDDGHNVQVSDLYSQNWDPRATISDFEGSLPHSELSNCFNEQSYATKQG TTSKIIQAEQKKLKEADLVIFQFPVYWFSVPAILKGWFDKVFAEGITHGFPDNVYENGLMKASHETESESRYTFTFCELT GERSESENFRYEVFNLLKFSHPYMYIQLLSILTSGASRTFFGIDGYRKESYAFSYDWSDTRNVFSKWKSWRHEYDNVADT GNDKASTRRRNNGKSDISGSKRDDSL |
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