Gene
| Gene Model ID | pfu_aug1.0_6408.1_67433 |
|---|---|
| Locus | scaffold6408.1 : 23571 ... 39225 : - |
| To GenomeBrowser | scaffold6408.1:23571..39225 |
| Genes list of scaffold | scaffold6408.1 |
| Synonym | pfu_aug2.0_211.1_03793 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6408.1_67433.t1 | 1 | 1 | Ank_2 | 5 | 96 | 7.0e-19 | 67.9 | 3.1e-22 | 9.2e-19 | 67.5 |
| pfu_aug1.0_6408.1_67433.t1 | 3 | 1 | Ank_5 | 5 | 39 | 4.6e-16 | 58.4 | 1.4e-08 | 4.2e-05 | 23.6 |
| pfu_aug1.0_6408.1_67433.t1 | 3 | 1 | Ank_4 | 5 | 52 | 2.7e-13 | 50.0 | 1.6e-09 | 4.9e-06 | 26.9 |
| pfu_aug1.0_6408.1_67433.t1 | 3 | 1 | Ank | 6 | 28 | 6.5e-22 | 76.1 | 2.9e-05 | 0.085 | 12.6 |
| pfu_aug1.0_6408.1_67433.t1 | 3 | 1 | Ank_3 | 6 | 27 | 2.4e-13 | 48.9 | 0.00019 | 0.56 | 10.6 |
| pfu_aug1.0_6408.1_67433.t1 | 3 | 2 | Ank_5 | 29 | 73 | 4.6e-16 | 58.4 | 4.5e-10 | 1.3e-06 | 28.3 |
| pfu_aug1.0_6408.1_67433.t1 | 3 | 2 | Ank | 31 | 63 | 6.5e-22 | 76.1 | 3.3e-14 | 9.7e-11 | 40.9 |
| pfu_aug1.0_6408.1_67433.t1 | 3 | 2 | Ank_3 | 31 | 60 | 2.4e-13 | 48.9 | 6.9e-08 | 0.0002 | 21.2 |
| pfu_aug1.0_6408.1_67433.t1 | 3 | 2 | Ank_4 | 47 | 81 | 2.7e-13 | 50.0 | 1.6e-07 | 0.00048 | 20.5 |
| pfu_aug1.0_6408.1_67433.t1 | 3 | 3 | Ank_5 | 51 | 100 | 4.6e-16 | 58.4 | 3.7e-08 | 0.00011 | 22.3 |
| pfu_aug1.0_6408.1_67433.t1 | 3 | 3 | Ank | 67 | 97 | 6.5e-22 | 76.1 | 4.4e-08 | 0.00013 | 21.5 |
| pfu_aug1.0_6408.1_67433.t1 | 3 | 3 | Ank_3 | 67 | 92 | 2.4e-13 | 48.9 | 1.2e-05 | 0.035 | 14.3 |
| pfu_aug1.0_6408.1_67433.t1 | 3 | 3 | Ank_4 | 67 | 101 | 2.7e-13 | 50.0 | 2.0e-05 | 0.06 | 13.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_6408.1_67433.t1 | gi|340376097|ref|XP_003386570.1| | PREDICTED: ankyrin repeat domain-containing protein 50-like [Amphimedon queenslandica] | 7.0e-20 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_6408.1_67433.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6408.1_67433.t1 atgggtgttgctaacgccgccgccaatggggatttaacgttactaaggcaactgctacggcaaggctgtgatgtgaatga gaggtctagagatggcatgactccgctggcacttgcggctttttggggttacgctgatatagtaagctgtcttatcgaga acagggcagacgttaatgcttgcaacaaagggacgttatggacagcccttcactgtgcagccttccaaggtcacggcaag gtcatcatgaaactgatggaggcaaatccaaatattacgctcaaagacaatcaaggacgatacctgcacaaatcgaatgt aggcctgtag |
|
Protein
| Protein ID | pfu_aug1.0_6408.1_67433.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6408.1_67433.t1 MGVANAAANGDLTLLRQLLRQGCDVNERSRDGMTPLALAAFWGYADIVSCLIENRADVNACNKGTLWTALHCAAFQGHGK VIMKLMEANPNITLKDNQGRYLHKSNVGL |
|