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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_64199.1_56364
Locus scaffold64199.1 : 456 ... 3252 : +
To GenomeBrowser scaffold64199.1:456..3252
Genes list of scaffold scaffold64199.1
Synonym pfu_aug2.0_409.1_30732

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_64199.1_56364.t1 1 1 Peptidase_M48 2 62 1.4e-15 57.4 1.1e-19 1.6e-15 57.3

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_64199.1_56364.t1 gi|241997528|ref|XP_002433413.1| prenyl protease, putative [Ixodes scapularis] 5.0e-23

Transcript
Transcript IDpfu_aug1.0_64199.1_56364.t1
Definition-
>pfu_aug1.0_64199.1_56364.t1
atgacagcgctgagccggaagttcgagtttcaagccgatgcttttgccaagacattgaggagagcttcagaactgaagtc
tgcactgataaagcttaacaaagacaaccttggattcccagtaacagattggctgtattctgcatggacctactcccatc
ctcccctgttagaaagaatgaaagctttagataaaacagattaa

Protein
Protein IDpfu_aug1.0_64199.1_56364.t1
Definition-
>pfu_aug1.0_64199.1_56364.t1
MTALSRKFEFQADAFAKTLRRASELKSALIKLNKDNLGFPVTDWLYSAWTYSHPPLLERMKALDKTD

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