Gene
| Gene Model ID | pfu_aug1.0_642.1_65555 |
|---|---|
| Locus | scaffold642.1 : 2716 ... 44367 : + |
| To GenomeBrowser | scaffold642.1:2716..44367 |
| Genes list of scaffold | scaffold642.1 |
| Synonym | pfu_aug2.0_7970.1_02944 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_642.1_65555.t1 | 2 | 1 | BTB | 26 | 133 | 8.0e-13 | 48.3 | 9.2e-16 | 6.8e-12 | 45.3 |
| pfu_aug1.0_642.1_65555.t1 | 2 | 2 | BTB | 134 | 164 | 8.0e-13 | 48.3 | 0.066 | 490.0 | 0.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_642.1_65555.t1 | gi|334312558|ref|XP_001381661.2| | PREDICTED: germ cell-less protein-like 1 [Monodelphis domestica] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| >Adult tissues | |
| maleGonad | 2 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_642.1_65555.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_642.1_65555.t1 atgcgggagtctcccgcgaaatgcgggagagttgacaggaaaaagttgctgtctacaaccaaatacatataccaaaccct gttccttgatggagaaaacagtgatataaagatatatgctttaggccaggaatggaaacttcataaagtctacttgtctc agtctccattttttgcgtgcatgtttaacggatcatggagagaagcgttacagacagagatagatctggacatacctgat cctgccatagacatcaaatctctgagaacagcatttggatcattgtacagagactatgtttttattaaaccaatagatgt agtgggagtatttgcagcagcaaacttattgcagttggaaggactaatacagcagtgcttgacaatgatgagtaacagca tcagttcagatacagtatgcagttattatgatgccagccttagatatgatatagactctgtgaagatggagtgctataac tggttattaaccaacctactgattgtacctgatgtggagctactcaaacagatcagtattcccttaatgaaaaacttggt atcagcttctgagttgtttgttatgcaagtagaaatggatatttactcactactgaaaaagtggatgtttttacaaatga agaaatcatggacaggaagtgataaagatctgcttgaagatgtcgagacatattataaaactgctacctcagaatgtgtg tttttagagtcaagcgaaggaagacagttcattccagctttccagggtctcagatggcagcatattgtaacagacttgac ttctcttaaagttcttgaaaaggacaaaataatcaagattgatcgactgaatccattatttcagcatgtttggaggcgca tgttaaatgtagagcatggatcagatcatggatttaggatcagtaccggaaacgtgcatgtctggtccatgcttaaaatt gatctgttcttaaatgatgctattgaatttgaaggcgtttattatttataccacttggaagtcttgttgatgactttaga tagtcaggtcagtttccccctctacctcagtatggacttgatgctgttatcgcctgaaacatcaatgcctcctctactca ccatcccggatctgctctctaccataaatacagacgtttctgatctgaagactgaatcctccacccagaccgacatgcct gaaatgaacgatacggcctcacagacggacccactattcagtctggtaacaaatgtatctggtggtgaagcagatattag ttaccaattagggaccgactctagatcacaaaatcaatctttcaaaataacaagtgttgccgatccacctcaatctgaga gatcgagcaagagtgatttagaattaattcacaggagcgctgatttatccatgactctacagcagggcactgaagataaa acttga |
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Protein
| Protein ID | pfu_aug1.0_642.1_65555.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_642.1_65555.t1 MRESPAKCGRVDRKKLLSTTKYIYQTLFLDGENSDIKIYALGQEWKLHKVYLSQSPFFACMFNGSWREALQTEIDLDIPD PAIDIKSLRTAFGSLYRDYVFIKPIDVVGVFAAANLLQLEGLIQQCLTMMSNSISSDTVCSYYDASLRYDIDSVKMECYN WLLTNLLIVPDVELLKQISIPLMKNLVSASELFVMQVEMDIYSLLKKWMFLQMKKSWTGSDKDLLEDVETYYKTATSECV FLESSEGRQFIPAFQGLRWQHIVTDLTSLKVLEKDKIIKIDRLNPLFQHVWRRMLNVEHGSDHGFRISTGNVHVWSMLKI DLFLNDAIEFEGVYYLYHLEVLLMTLDSQVSFPLYLSMDLMLLSPETSMPPLLTIPDLLSTINTDVSDLKTESSTQTDMP EMNDTASQTDPLFSLVTNVSGGEADISYQLGTDSRSQNQSFKITSVADPPQSERSSKSDLELIHRSADLSMTLQQGTEDK T |
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