Gene
| Gene Model ID | pfu_aug1.0_643.1_29374 |
|---|---|
| Locus | scaffold643.1 : 325 ... 4096 : + |
| To GenomeBrowser | scaffold643.1:325..4096 |
| Genes list of scaffold | scaffold643.1 |
| Synonym | pfu_aug2.0_366.1_20676 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_643.1_29374.t1 | 2 | 1 | ABC2_membrane | 106 | 311 | 8.4e-31 | 106.7 | 5.7e-35 | 8.4e-31 | 106.7 |
| pfu_aug1.0_643.1_29374.t1 | 2 | 2 | ABC2_membrane | 345 | 367 | 8.4e-31 | 106.7 | 0.22 | 3200.0 | -3.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_643.1_29374.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_643.1_29374.t1 atgccgtttaaaggcatcaactcctcggagctttgcctgacctacatgataattgatatacagatgtatcatcgtgaaat gcagatgaaggtaggtcaattgaaattccgtgtagaatcggtgccccacaacacaaaaggttacgaagtaaaaacacacc aagtatccatggaaacatctgatgccagtatacatgctctgggatttcaaagaacagattcctctaagtgtattttggac ataagtacaataaacatcaaagacgccgaccgtgaagatcagagaacgacgaggaggtggccgaccggattctggaccca gtaccgtatgcttacatggaggaactacaggcaatccaaggggaggatatttgagcgttatgagagtgcgcagtcgttac taatggccattataggaggatgtatgtactttcaaatagctgacactctggacacattccgtgaccgtatgggagctata tttttttgtgtcgtgtactggggcttcaacatgatgttgttcactatatcaggatttccaggtgagagagttgtcatcaa caaagagcgtagggcaggcgcatatcggctctcatcctactacctggcaaaaatctcgagcgagttgcctctccttataa tcatgccaatcatattcttctccatcatctattggatgtcgatgatagggggcgtgtctggatttttcattttcattggc attaatttgatgagttgtttgttgattcagggacttggccatattattggagctcttatggttaacataagacatgccat tacagtggctaataccatcatggtcggctctttggttcttgccggatttttcaatacccatttcccgtcttggctttttt gggccaaatacctttctttggtacactaccccctgagtgccatggttatcacagtacttgcagacactgatcctataccg tgtaatcaaaccacagcagaaacatttgaaatttgtgaaacatcagagttcctcacgggaaaagacatacttttgagtgt gggcatagaccttcctattcactgttacctatctactatggcaatactgattgtactcctgaaaattctgggatactatg tactgaagtggaagaagggatga |
|
Protein
| Protein ID | pfu_aug1.0_643.1_29374.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_643.1_29374.t1 MPFKGINSSELCLTYMIIDIQMYHREMQMKVGQLKFRVESVPHNTKGYEVKTHQVSMETSDASIHALGFQRTDSSKCILD ISTINIKDADREDQRTTRRWPTGFWTQYRMLTWRNYRQSKGRIFERYESAQSLLMAIIGGCMYFQIADTLDTFRDRMGAI FFCVVYWGFNMMLFTISGFPGERVVINKERRAGAYRLSSYYLAKISSELPLLIIMPIIFFSIIYWMSMIGGVSGFFIFIG INLMSCLLIQGLGHIIGALMVNIRHAITVANTIMVGSLVLAGFFNTHFPSWLFWAKYLSLVHYPLSAMVITVLADTDPIP CNQTTAETFEICETSEFLTGKDILLSVGIDLPIHCYLSTMAILIVLLKILGYYVLKWKKG |
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