Gene
| Gene Model ID | pfu_aug1.0_643.1_29375 |
|---|---|
| Locus | scaffold643.1 : 21398 ... 56065 : - |
| To GenomeBrowser | scaffold643.1:21398..56065 |
| Genes list of scaffold | scaffold643.1 |
| Synonym | pfu_aug2.0_366.1_20674 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_643.1_29375.t1 | 1 | 1 | ABC2_membrane | 331 | 513 | 8.6e-24 | 83.8 | 8.0e-28 | 1.2e-23 | 83.4 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| >Adult tissues | |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_643.1_29375.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_643.1_29375.t1 atgacagggaggtttgcaaagaggttttttttacttgcacacgatataggggaaaaggtcctgaagaatttggttaaaca tttgaaagagaatggccctgtcccccgccaacatggtaacagaggcaagcgaccacatcatgcattatcgtttgaggatg tcaagagcatcgtcaaatttattgtaagttatgccgacgacgaaggcctacccttgccggccgtgccacatgccaatgac ggcgacgccccgatcctcttgcctgcgtcaaccacaaagtgcggcatgcatgaaaaatataaagaaggctgtctacagaa tggtgacagagctgcagacgaacacaaagtgtacatagaaatggtgaagctggcaagggacgagttcaactcctcaggac tgcagttaccccttggaacatgcattgcgggtccatgctgtaatgatgcattcaatgaacccacatcaggactggattct agcactgcccacacattaatggggcagcttaaaggttatgctacaacctacaataaaaccatcatagccaccattcatca accatcaagtcagatataccacatgttctgtaaactgctcttattggtcaacggccatacggcgtactttggtgaggctg acaaggccttgagatattttgataacattggtctgacctgtcagcctaactataaccctgctgactttctactggaactt ctgaagtctgatgatgacgtaatagagaaaatcctagcctcggcaacaaaacacgagaatttccgtgttgaatcggtacc ccacaacacaaaaagttacttagtcaaaacacatcaagtatccatggaaacatctgacgccagtatacacgccctgagat ttcaaagaacagattcctctaagtgtattttggacatcagtaccacaaacatcaaagacgccgacattgaagatcagaag acgacgaggaggtggccgaccggattctggacccagtaccgtatgcttacatggaggaactacaggcaagccaagggaag gatatttgaaccgtatgaggttgcgcagtgcctacttatggctgttatagcaggatgtatgtattttcagatagctgata ctctggacacattccgagaccgcattggagcaatattctttagtgtcgtgtactggggattcgtcatgctgttcttcact atatcaggatttccaggtgagagagttgtcatcaccaaagagcgcagggcaggtgcatatcggctctcatcctactattt agcaaaaatctcaagcgagttgcctctccttattgtgatgccaatcatattctactccatattctattggatgtcaatga tagggggcgtgtctggttttttcattttcattggaattaatttgatgagttgtttcttgattcagggagttggacatatt ataggagctcttattgttaatacaggacatgccttcacagttgtcaacactattatggtcagctctttagttcttgattt atttttatacacatatgaaaaggaatttattcaaaatcttcaaaaacaaagaaaaaatgatgatgtgaaatgtttcattg gtacttctaagtacctggatgatattcttactatcgacaatcctgtttttgagaaatataaaaatgttatttatccaaaa gaattgattttaaacaaggcaaacgtttcaaacacagaaacaccaattttggacctaaatatcaaaattgaaaaaagatc catacaagtgtttattggtgacttcatggtacgtgggttgtccggtggagagaagaaacgtgccaattatgttgattga |
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Protein
| Protein ID | pfu_aug1.0_643.1_29375.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_643.1_29375.t1 MTGRFAKRFFLLAHDIGEKVLKNLVKHLKENGPVPRQHGNRGKRPHHALSFEDVKSIVKFIVSYADDEGLPLPAVPHAND GDAPILLPASTTKCGMHEKYKEGCLQNGDRAADEHKVYIEMVKLARDEFNSSGLQLPLGTCIAGPCCNDAFNEPTSGLDS STAHTLMGQLKGYATTYNKTIIATIHQPSSQIYHMFCKLLLLVNGHTAYFGEADKALRYFDNIGLTCQPNYNPADFLLEL LKSDDDVIEKILASATKHENFRVESVPHNTKSYLVKTHQVSMETSDASIHALRFQRTDSSKCILDISTTNIKDADIEDQK TTRRWPTGFWTQYRMLTWRNYRQAKGRIFEPYEVAQCLLMAVIAGCMYFQIADTLDTFRDRIGAIFFSVVYWGFVMLFFT ISGFPGERVVITKERRAGAYRLSSYYLAKISSELPLLIVMPIIFYSIFYWMSMIGGVSGFFIFIGINLMSCFLIQGVGHI IGALIVNTGHAFTVVNTIMVSSLVLDLFLYTYEKEFIQNLQKQRKNDDVKCFIGTSKYLDDILTIDNPVFEKYKNVIYPK ELILNKANVSNTETPILDLNIKIEKRSIQVFIGDFMVRGLSGGEKKRANYVD |
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