Gene
Gene Model ID | pfu_aug1.0_6444.1_02244 |
---|---|
Locus | scaffold6444.1 : 34096 ... 38070 : + |
To GenomeBrowser | scaffold6444.1:34096..38070 |
Genes list of scaffold | scaffold6444.1 |
Synonym | NA |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_6444.1_02244.t1 | 1 | 1 | Asp_protease | 217 | 311 | 6.5e-07 | 28.9 | 7.6e-10 | 1.6e-06 | 27.6 |
pfu_aug1.0_6444.1_02244.t1 | 1 | 1 | RVP | 219 | 309 | 6.6e-08 | 32.3 | 6.6e-11 | 1.4e-07 | 31.3 |
pfu_aug1.0_6444.1_02244.t1 | 1 | 1 | Asp_protease_2 | 221 | 302 | 3.3e-07 | 30.7 | 1.5e-10 | 3.3e-07 | 30.7 |
pfu_aug1.0_6444.1_02244.t1 | 1 | 1 | RVP_2 | 226 | 319 | 8.1e-06 | 25.8 | 7.2e-09 | 1.5e-05 | 24.9 |
Transcript
Transcript ID | pfu_aug1.0_6444.1_02244.t1 |
---|---|
Definition | - |
>pfu_aug1.0_6444.1_02244.t1 atggatctctatagggcgcaacttaaggatagaaagcaaaaagcctcagagtccatacccgaattaggtcaggacatacg aaggcttaccaacctggcatacgccaaggcccctaatgatgtcagagaaacattagctactgaatatttcatagactccc tacatagctctgacatgagactacgcattaaacagtcaaggcctaagaacttaaataaagctatatgtttagctgtagaa cttgatgcttttaataaagcagataagaaacgagaggaagttggtggctttgttctgcgtacggatgccgacgcaccatg cgagagctcgttagtacgtaaaatgcttgaggataccaacaaggccttaagcgaaacgcacagggaaatcaaagaaatta aagacaatcaaaagttaggtcaacaaacaggtgttcagacattgccttctcaagtggttaaacctagatttaagtgctat ttttgtgggaaggacgggcatatcaaaaagaaatgtcgtaaattccttgctcttgagaaccaacaaaatcaaggcaagac caatacaggtacgaacaattcaaagggtgaacgaaataagttgtctgtcgggtctatggacatagccagtaaggtcggac aatcgggtctctatatacatgctgacatagatggcactggtgttaagttactggttgacacaggggcaactgttagtcta attgcacctagacatgttggtgatgtgccattggaatcattgaatgctgatatcctcattgctgatggttcagcactgtc agtacttgggacgaccactttgcgtataaagataggtagtttttcaatgcctcataagtttattgtagcagatataggaa tagacggtatattggggcttgacttcatgaagaatcatgattgttcagttgacatagcacacaaaaccatgaaatttaat cattgcatcgacttgttcgtggaaggtaacgttggttgttacagagtttatctagacgagtcattacatgtacctgctaa aaatgaggtcttagcactttgttcggtccatgacaaatctggtcagatattaccaaatataagtgttggtatgatagaac caatcgatagttttactaagtcagacagaggtataaaaacacgtaaattgacagaatatgcatgtgatgtatgtgacttt aagtcctgtaaaccctcaaatgttaagagacataagaatcgtgcgcataaaggacttattccgcctcttactcctctcga aaagaaggatgtccccagcacctctacagagaagaccggggaagaatcggactggcatacacaagatcctggagaactta ttgatcatgctaatgactcgtcggctgacgagggatccgattgtccagtgatgatagtgacaaagatgatgatcgtgctg ctgatttga |
Protein
Protein ID | pfu_aug1.0_6444.1_02244.t1 |
---|---|
Definition | - |
>pfu_aug1.0_6444.1_02244.t1 MDLYRAQLKDRKQKASESIPELGQDIRRLTNLAYAKAPNDVRETLATEYFIDSLHSSDMRLRIKQSRPKNLNKAICLAVE LDAFNKADKKREEVGGFVLRTDADAPCESSLVRKMLEDTNKALSETHREIKEIKDNQKLGQQTGVQTLPSQVVKPRFKCY FCGKDGHIKKKCRKFLALENQQNQGKTNTGTNNSKGERNKLSVGSMDIASKVGQSGLYIHADIDGTGVKLLVDTGATVSL IAPRHVGDVPLESLNADILIADGSALSVLGTTTLRIKIGSFSMPHKFIVADIGIDGILGLDFMKNHDCSVDIAHKTMKFN HCIDLFVEGNVGCYRVYLDESLHVPAKNEVLALCSVHDKSGQILPNISVGMIEPIDSFTKSDRGIKTRKLTEYACDVCDF KSCKPSNVKRHKNRAHKGLIPPLTPLEKKDVPSTSTEKTGEESDWHTQDPGELIDHANDSSADEGSDCPVMIVTKMMIVL LI |