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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_6444.1_02244
Locus scaffold6444.1 : 34096 ... 38070 : +
To GenomeBrowser scaffold6444.1:34096..38070
Genes list of scaffold scaffold6444.1
Synonym NA

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_6444.1_02244.t1 1 1 Asp_protease 217 311 6.5e-07 28.9 7.6e-10 1.6e-06 27.6
pfu_aug1.0_6444.1_02244.t1 1 1 RVP 219 309 6.6e-08 32.3 6.6e-11 1.4e-07 31.3
pfu_aug1.0_6444.1_02244.t1 1 1 Asp_protease_2 221 302 3.3e-07 30.7 1.5e-10 3.3e-07 30.7
pfu_aug1.0_6444.1_02244.t1 1 1 RVP_2 226 319 8.1e-06 25.8 7.2e-09 1.5e-05 24.9

Transcript
Transcript IDpfu_aug1.0_6444.1_02244.t1
Definition-
>pfu_aug1.0_6444.1_02244.t1
atggatctctatagggcgcaacttaaggatagaaagcaaaaagcctcagagtccatacccgaattaggtcaggacatacg
aaggcttaccaacctggcatacgccaaggcccctaatgatgtcagagaaacattagctactgaatatttcatagactccc
tacatagctctgacatgagactacgcattaaacagtcaaggcctaagaacttaaataaagctatatgtttagctgtagaa
cttgatgcttttaataaagcagataagaaacgagaggaagttggtggctttgttctgcgtacggatgccgacgcaccatg
cgagagctcgttagtacgtaaaatgcttgaggataccaacaaggccttaagcgaaacgcacagggaaatcaaagaaatta
aagacaatcaaaagttaggtcaacaaacaggtgttcagacattgccttctcaagtggttaaacctagatttaagtgctat
ttttgtgggaaggacgggcatatcaaaaagaaatgtcgtaaattccttgctcttgagaaccaacaaaatcaaggcaagac
caatacaggtacgaacaattcaaagggtgaacgaaataagttgtctgtcgggtctatggacatagccagtaaggtcggac
aatcgggtctctatatacatgctgacatagatggcactggtgttaagttactggttgacacaggggcaactgttagtcta
attgcacctagacatgttggtgatgtgccattggaatcattgaatgctgatatcctcattgctgatggttcagcactgtc
agtacttgggacgaccactttgcgtataaagataggtagtttttcaatgcctcataagtttattgtagcagatataggaa
tagacggtatattggggcttgacttcatgaagaatcatgattgttcagttgacatagcacacaaaaccatgaaatttaat
cattgcatcgacttgttcgtggaaggtaacgttggttgttacagagtttatctagacgagtcattacatgtacctgctaa
aaatgaggtcttagcactttgttcggtccatgacaaatctggtcagatattaccaaatataagtgttggtatgatagaac
caatcgatagttttactaagtcagacagaggtataaaaacacgtaaattgacagaatatgcatgtgatgtatgtgacttt
aagtcctgtaaaccctcaaatgttaagagacataagaatcgtgcgcataaaggacttattccgcctcttactcctctcga
aaagaaggatgtccccagcacctctacagagaagaccggggaagaatcggactggcatacacaagatcctggagaactta
ttgatcatgctaatgactcgtcggctgacgagggatccgattgtccagtgatgatagtgacaaagatgatgatcgtgctg
ctgatttga

Protein
Protein IDpfu_aug1.0_6444.1_02244.t1
Definition-
>pfu_aug1.0_6444.1_02244.t1
MDLYRAQLKDRKQKASESIPELGQDIRRLTNLAYAKAPNDVRETLATEYFIDSLHSSDMRLRIKQSRPKNLNKAICLAVE
LDAFNKADKKREEVGGFVLRTDADAPCESSLVRKMLEDTNKALSETHREIKEIKDNQKLGQQTGVQTLPSQVVKPRFKCY
FCGKDGHIKKKCRKFLALENQQNQGKTNTGTNNSKGERNKLSVGSMDIASKVGQSGLYIHADIDGTGVKLLVDTGATVSL
IAPRHVGDVPLESLNADILIADGSALSVLGTTTLRIKIGSFSMPHKFIVADIGIDGILGLDFMKNHDCSVDIAHKTMKFN
HCIDLFVEGNVGCYRVYLDESLHVPAKNEVLALCSVHDKSGQILPNISVGMIEPIDSFTKSDRGIKTRKLTEYACDVCDF
KSCKPSNVKRHKNRAHKGLIPPLTPLEKKDVPSTSTEKTGEESDWHTQDPGELIDHANDSSADEGSDCPVMIVTKMMIVL
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