Gene
| Gene Model ID | pfu_aug1.0_6452.1_60017 |
|---|---|
| Locus | scaffold6452.1 : 10776 ... 25838 : + |
| To GenomeBrowser | scaffold6452.1:10776..25838 |
| Genes list of scaffold | scaffold6452.1 |
| Synonym | pfu_aug2.0_571.1_04351 |
Manual annotation
| Study field | Reproduction |
|---|---|
| Gene name | Insulin-like growth factor 2 mRNA-binding protein 1 |
| Description | NCBI BlastP top hit to Camponotus floridanus IGF2 mRNA-binding protein 1[EFN73581.1] |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6452.1_60017.t1 | 2 | 1 | KH_3 | 63 | 76 | 1.2e-10 | 40.7 | 0.045 | 170.0 | 2.0 |
| pfu_aug1.0_6452.1_60017.t1 | 2 | 1 | KH_1 | 66 | 88 | 5.4e-15 | 54.7 | 0.007 | 26.0 | 4.5 |
| pfu_aug1.0_6452.1_60017.t1 | 2 | 2 | KH_1 | 109 | 173 | 5.4e-15 | 54.7 | 1.4e-16 | 5.3e-13 | 48.3 |
| pfu_aug1.0_6452.1_60017.t1 | 2 | 2 | KH_3 | 116 | 161 | 1.2e-10 | 40.7 | 4.4e-13 | 1.6e-09 | 37.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_6452.1_60017.t1 | gi|307189125|gb|EFN73581.1| | 2.0e-31 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_6452.1_60017.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6452.1_60017.t1 atgtttgttgtgtctcgtgataaactccggggagttccaatcgctaatcggaatgcgggggacgtctcaaaactctactt gtgttggagcatattggattttattgattttgcgtttgtgccacagggcgcagcgtataccatactgccccagaagaatg gagagatgaatggtgagaggaaaggaccctccccacaactagatgaaaggaaggtcattataacaggctccgctgaagcc caatggaaggcgcagttctacattttcgacaaaataaagatggagggaaactttcagaggttagaggaggttcacctcag gtcagaggtcatggtaccaaggagtatgattggtcgaatcataggcaaaggaggtcaaaatgtacgtgaaatgcagagag tcagtggtgctatagtgaagctaccagacccaaacaaccaaaacccgacagataacgacgaagtcgctgtatccattata ggacatttttatgccatccaacccgctcagagaaggatccgatcactcgttcagcagcgaggtgcacctcagggaatggg cggcccccctcagaggcgtcctggcccaccaagacctcaacaaaatggcaaataa |
|
Protein
| Protein ID | pfu_aug1.0_6452.1_60017.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6452.1_60017.t1 MFVVSRDKLRGVPIANRNAGDVSKLYLCWSILDFIDFAFVPQGAAYTILPQKNGEMNGERKGPSPQLDERKVIITGSAEA QWKAQFYIFDKIKMEGNFQRLEEVHLRSEVMVPRSMIGRIIGKGGQNVREMQRVSGAIVKLPDPNNQNPTDNDEVAVSII GHFYAIQPAQRRIRSLVQQRGAPQGMGGPPQRRPGPPRPQQNGK |
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