Gene
| Gene Model ID | pfu_aug1.0_6467.1_31209 |
|---|---|
| Locus | scaffold6467.1 : 1 ... 18705 : - |
| To GenomeBrowser | scaffold6467.1:1..18705 |
| Genes list of scaffold | scaffold6467.1 |
| Synonym | pfu_aug2.0_3.1_10046 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6467.1_31209.t1 | 1 | 1 | Dymeclin | 37 | 131 | 1.1e-15 | 56.8 | 8.7e-20 | 1.3e-15 | 56.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_6467.1_31209.t1 | gi|71897205|ref|NP_001026569.1| | dymeclin [Gallus gallus] | 1.0e-28 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| mantlePallium | 1 |
Transcript
| Transcript ID | pfu_aug1.0_6467.1_31209.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6467.1_31209.t1 atgcattgtgacgtcacgagtgttaatacacgaattgcagcacgttttctttcaatagtaacatctcagggaattacatt ggttgtgcatatatatcaagaagtcagtatgggagctaatagcagtagtatcagtgagctcacgaataacgagtacctga gacgtctgtcggcagcagaacctattaatcctatagatccattctggaatcagctcctctcctactcattcctcatacct ataaacagtactgatgctaagctgcttgaggaatcaacgtcttccatctgtaagaatctagccatacataacactaagag cgggaactttggtgccctcatcagaaacttccttgtacgagctacagaactgaaagcatcagctcagtgtgaagagtaa |
|
Protein
| Protein ID | pfu_aug1.0_6467.1_31209.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6467.1_31209.t1 MHCDVTSVNTRIAARFLSIVTSQGITLVVHIYQEVSMGANSSSISELTNNEYLRRLSAAEPINPIDPFWNQLLSYSFLIP INSTDAKLLEESTSSICKNLAIHNTKSGNFGALIRNFLVRATELKASAQCEE |
|