Gene
| Gene Model ID | pfu_aug1.0_6470.1_52768 |
|---|---|
| Locus | scaffold6470.1 : 5456 ... 35849 : + |
| To GenomeBrowser | scaffold6470.1:5456..35849 |
| Genes list of scaffold | scaffold6470.1 |
| Synonym | pfu_aug2.0_107.1_23481 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6470.1_52768.t2 | 2 | 1 | Adaptin_N | 24 | 276 | 0.0 | 372.9 | 0.0 | 0.0 | 270.4 |
| pfu_aug1.0_6470.1_52768.t2 | 2 | 1 | Cnd1 | 26 | 55 | 8.3e-07 | 29.0 | 0.52 | 1300.0 | -1.0 |
| pfu_aug1.0_6470.1_52768.t2 | 2 | 2 | Cnd1 | 123 | 330 | 8.3e-07 | 29.0 | 8.2e-10 | 2.0e-06 | 27.7 |
| pfu_aug1.0_6470.1_52768.t2 | 2 | 2 | Adaptin_N | 293 | 500 | 0.0 | 372.9 | 3.9e-34 | 9.6e-31 | 106.6 |
| pfu_aug1.0_6470.1_52768.t2 | 1 | 1 | BLVR | 587 | 713 | 1.3e-12 | 47.8 | 5.2e-16 | 1.3e-12 | 47.8 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| maleGonad | 1 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_6470.1_52768.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6470.1_52768.t1 atgttggattcatcttttggtgtaagtacaggtcaaggcagagttgaaggacatggattaatgccgggaaaatacatcgc tgaatgtatagatgagatcaagcaggagttacgccaagaaaatgtagcagtaaagtcaaatgcggtcaacaaactgatct atctacaaatgcttggatatgacataagctgggctgccttcaacatcattgaggtgatgagctctaccaagttcacttac aagagaattggttatatagcagcatcacagagtttccatgatggcaccgatgttctgatgttaaccaccaatatgataag aaaggatttgagcagccaaagtatgtatgatgccggtacagctctgacaggattatcatgctttgttacaccagacttgg ccagggatttagccaatgacattatgactttgatgacgtctacaagaccatacctgaggaaaaaggcagtcctcatcatg tataaagtcttcctacaattccctgaggcattacgtccagcattcccccgattgaaggaaaaattagaagatcccgaccc aggtgtgcaatcagctgccgtcaatgttatctgtgaactggccaggaagaatccacagaattatctctccttagctccac tgttcttcaagcttatgacaagttctacaaacaactgggtgctcataaagatcatcaaactgtttagtgccctgacacct ctggaaccaagacttgggaagaagcttatcgaacccttaacaaatcttatacacagcacctcagccatgtccctactata tgagtgtattaatacagtcatagcagtactcatttctatatcttcaggcatccctaaccacactgcctccattcaggttt ctaagaagaatctaatggagatagtgaagaagcttatggtacatatggacaaggctgaaggaacacactacagggatgaa ctactagccaaaatcatagaaatatctagtcaatccaactaccaatatgtaaccaactttgaatggtatgtgagtgtatt agtggagctgacgcggatggaaggaaccagacacggtcggctgattgcatcacaaatgttggatgtagctataagagtac aagccataagacctttcactgtggctcaaatggctttattacttgagaattcccatgtgttggccagtaattctcagcgg aatggcatttgtgaagtactgtatgctgctgcttggatttgtggggagttctctaaacacttatctagtcctcgtgagac attagaagccatgctgaagcccaaaatcacctccttaccaggtcatatacagagtatttatgtacaaaacatcttgaaac tgtttggtaatctgatgagatctgcacaggaggaggagaatacagacttaatgagggagatggcacagcttctgatagat aaactacccatgtttgttcagagtgctgatctagaggtccaagatagggcgtgttgtatgttacaacttgtgaagtatgt gatgaagttaatggacaagggtgcaccagtagcagatgaggtgtgctcactgtttgccggggatttgaatcctgtagcac ctaaagcccagagaaaagtccctgtaccagagggacttgacctggacaagtggatcaatgagccaccatcagagagctcg tcagaagaagatgtgggtgtgtccatattctctttaaagaacgaggacagcaaatcctttggataccaaaatgataagaa actgccagaaccaacagaagaagaactggaagagaggagaaagcagaggaagatagaacagatgcacaacccccattacc tcaggatggacaataaaaagaagaagaagaaagacaatgcagacgatgtaatggatgaggagagtcctgttgtaaagatt gacctgtctgttccactccatgtacctggtaaacctttaagagacgatgaaaaattacctgtgagaacacataggatagt gttagattcccctcagacaggagagggggattcagagaaaccacgcaggaaaaagaaagccaaggaaaaagatgctgaag acaagaaaaaacataagaaagaaggaaaagaaaagaaaaagaaaaaacgagagagaagagatgagagcgctgggtctgca tcaaatctccttatggaaacagacacagttacttcccctgaagccgaaaaagagtttgtcaaagatgatacccccacccc taatcacatacaggaggactctaaacaaaaggatgatgatatggaattttggttatccaataacggtacacctacagagg aaaaagttgcagcaggaaatactgaagtgaaagtgaaagtaaacgataaggatgtatctagtgcggaagaagacactatc aaagaggttaaaaaagaattgaaaatagatgggaaaagtacagacaataatttattatctaacgttttacaagaaatcaa ggatacattagtttag |
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| Transcript ID | pfu_aug1.0_6470.1_52768.t2 |
| Definition | - |
>pfu_aug1.0_6470.1_52768.t2 atgttggattcatcttttggtgtaagtacaggtcaaggcagagttgaaggacatggattaatgccgggaaaatacatcgc tgaatgtatagatgagatcaagcaggagttacgccaagaaaatgtagcagtaaagtcaaatgcggtcaacaaactgatct atctacaaatgcttggatatgacataagctgggctgccttcaacatcattgaggtgatgagctctaccaagttcacttac aagagaattggttatatagcagcatcacagagtttccatgatggcaccgatgttctgatgttaaccaccaatatgataag aaaggatttgagcagccaaagtatgtatgatgccggtacagctctgacaggattatcatgctttgttacaccagacttgg ccagggatttagccaatgacattatgactttgatgacgtctacaagaccatacctgaggaaaaaggcagtcctcatcatg tataaagtcttcctacaattccctgaggcattacgtccagcattcccccgattgaaggaaaaattagaagatcccgaccc aggtgtgcaatcagctgccgtcaatgttatctgtgaactggccaggaagaatccacagaattatctctccttagctccac tgttcttcaagcttatgacaagttctacaaacaactgggtgctcataaagatcatcaaactgtttagtgccctgacacct ctggaaccaagacttgggaagaagcttatcgaacccttaacaaatcttatacacagcacctcagccatgtccctactata tgagtgtattaatacagtcatagcagtactcatttctatatcttcaggcatccctaaccacactgcctccattcaggttt ctaagaagaatctaatggagatagtgaagaagcttatggtacatatggacaaggctgaaggaacacactacagggatgaa ctactagccaaaatcatagaaatatctagtcaatccaactaccaatatgtaaccaactttgaatggtatgtgagtgtatt agtggagctgacgcggatggaaggaaccagacacggtcggctgattgcatcacaaatgttggatgtagctataagagtac aagccataagacctttcactgtggctcaaatgaattcccatgtgttggccagtaattctcagcggaatggcatttgtgaa gtactgtatgctgctgcttggatttgtggggagttctctaaacacttatctagtcctcgtgagacattagaagccatgct gaagcccaaaatcacctccttaccaggtcatatacagagtatttatgtacaaaacatcttgaaactgtttggtaatctga tgagatctgcacaggaggaggagaatacagacttaatgagggagatggcacagcttctgatagataaactacccatgttt gttcagagtgctgatctagaggtccaagatagggcgtgttgtatgttacaacttgtgaagtatgtgatgaagttaatgga caagggtgcaccagtagcagatgaggtgtgctcactgtttgccggggatttgaatcctgtagcacctaaagcccagagaa aagtccctgtaccagagggacttgacctggacaagtggatcaatgagccaccatcagagagctcgtcagaagaagatgtg ggtgtgtccatattctctttaaagaacgaggacagcaaatcctttggataccaaaatgataagaaactgccagaaccaac agaagaagaactggaagagaggagaaagcagaggaagatagaacagatgcacaacccccattacctcaggatggacaata aaaagaagaagaagaaagacaatgcagacgatgtaatggatgaggagagtcctgttgtaaagattgacctgtctgttcca ctccatgtacctggtaaacctttaagagacgatgaaaaattacctgtgagaacacataggatagtgttagattcccctca gacaggagagggggattcagagaaaccacgcaggaaaaagaaagccaaggaaaaagatgctgaagacaagaaaaaacata agaaagaaggaaaagaaaagaaaaagaaaaaacgagagagaagagatgagagcgctgggtctgcatcaaatctccttatg gaaacagacacagttacttcccctgaagccgaaaaagagtttgtcaaagatgatacccccacccctaatcacatacagga ggactctaaacaaaaggatgatgatatggaattttggttatccaataacggtacacctacagaggaaaaagttgcagcag gaaatactgaagtgaaagtgaaagtaaacgataaggatgtatctagtgcggaagaagacactatcaaagaggttaaaaaa gaattgaaaatagatgggaaaagtacagacaataatttattatctaacgttttacaagaaatcaaggatacattagttta g |
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Protein
| Protein ID | pfu_aug1.0_6470.1_52768.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6470.1_52768.t1 MLDSSFGVSTGQGRVEGHGLMPGKYIAECIDEIKQELRQENVAVKSNAVNKLIYLQMLGYDISWAAFNIIEVMSSTKFTY KRIGYIAASQSFHDGTDVLMLTTNMIRKDLSSQSMYDAGTALTGLSCFVTPDLARDLANDIMTLMTSTRPYLRKKAVLIM YKVFLQFPEALRPAFPRLKEKLEDPDPGVQSAAVNVICELARKNPQNYLSLAPLFFKLMTSSTNNWVLIKIIKLFSALTP LEPRLGKKLIEPLTNLIHSTSAMSLLYECINTVIAVLISISSGIPNHTASIQVSKKNLMEIVKKLMVHMDKAEGTHYRDE LLAKIIEISSQSNYQYVTNFEWYVSVLVELTRMEGTRHGRLIASQMLDVAIRVQAIRPFTVAQMALLLENSHVLASNSQR NGICEVLYAAAWICGEFSKHLSSPRETLEAMLKPKITSLPGHIQSIYVQNILKLFGNLMRSAQEEENTDLMREMAQLLID KLPMFVQSADLEVQDRACCMLQLVKYVMKLMDKGAPVADEVCSLFAGDLNPVAPKAQRKVPVPEGLDLDKWINEPPSESS SEEDVGVSIFSLKNEDSKSFGYQNDKKLPEPTEEELEERRKQRKIEQMHNPHYLRMDNKKKKKKDNADDVMDEESPVVKI DLSVPLHVPGKPLRDDEKLPVRTHRIVLDSPQTGEGDSEKPRRKKKAKEKDAEDKKKHKKEGKEKKKKKRERRDESAGSA SNLLMETDTVTSPEAEKEFVKDDTPTPNHIQEDSKQKDDDMEFWLSNNGTPTEEKVAAGNTEVKVKVNDKDVSSAEEDTI KEVKKELKIDGKSTDNNLLSNVLQEIKDTLV |
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| Protein ID | pfu_aug1.0_6470.1_52768.t2 |
| Definition | - |
>pfu_aug1.0_6470.1_52768.t2 MLDSSFGVSTGQGRVEGHGLMPGKYIAECIDEIKQELRQENVAVKSNAVNKLIYLQMLGYDISWAAFNIIEVMSSTKFTY KRIGYIAASQSFHDGTDVLMLTTNMIRKDLSSQSMYDAGTALTGLSCFVTPDLARDLANDIMTLMTSTRPYLRKKAVLIM YKVFLQFPEALRPAFPRLKEKLEDPDPGVQSAAVNVICELARKNPQNYLSLAPLFFKLMTSSTNNWVLIKIIKLFSALTP LEPRLGKKLIEPLTNLIHSTSAMSLLYECINTVIAVLISISSGIPNHTASIQVSKKNLMEIVKKLMVHMDKAEGTHYRDE LLAKIIEISSQSNYQYVTNFEWYVSVLVELTRMEGTRHGRLIASQMLDVAIRVQAIRPFTVAQMNSHVLASNSQRNGICE VLYAAAWICGEFSKHLSSPRETLEAMLKPKITSLPGHIQSIYVQNILKLFGNLMRSAQEEENTDLMREMAQLLIDKLPMF VQSADLEVQDRACCMLQLVKYVMKLMDKGAPVADEVCSLFAGDLNPVAPKAQRKVPVPEGLDLDKWINEPPSESSSEEDV GVSIFSLKNEDSKSFGYQNDKKLPEPTEEELEERRKQRKIEQMHNPHYLRMDNKKKKKKDNADDVMDEESPVVKIDLSVP LHVPGKPLRDDEKLPVRTHRIVLDSPQTGEGDSEKPRRKKKAKEKDAEDKKKHKKEGKEKKKKKRERRDESAGSASNLLM ETDTVTSPEAEKEFVKDDTPTPNHIQEDSKQKDDDMEFWLSNNGTPTEEKVAAGNTEVKVKVNDKDVSSAEEDTIKEVKK ELKIDGKSTDNNLLSNVLQEIKDTLV |
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