Gene
| Gene Model ID | pfu_aug1.0_6470.1_52769 |
|---|---|
| Locus | scaffold6470.1 : 36569 ... 57085 : - |
| To GenomeBrowser | scaffold6470.1:36569..57085 |
| Genes list of scaffold | scaffold6470.1 |
| Synonym | pfu_aug2.0_107.1_23480 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6470.1_52769.t1 | 1 | 1 | Dynamin_N | 22 | 108 | 1.6e-09 | 37.8 | 5.0e-13 | 2.5e-09 | 37.1 |
| pfu_aug1.0_6470.1_52769.t1 | 1 | 1 | Pkinase_Tyr | 513 | 718 | 1.7e-13 | 50.2 | 5.8e-17 | 2.9e-13 | 49.4 |
| pfu_aug1.0_6470.1_52769.t1 | 1 | 1 | Pkinase | 520 | 715 | 5.7e-14 | 51.8 | 2.2e-17 | 1.1e-13 | 50.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_6470.1_52769.t1 | gi|260830298|ref|XP_002610098.1| | hypothetical protein BRAFLDRAFT_89869 [Branchiostoma floridae] | 4.0e-28 |
Transcript
| Transcript ID | pfu_aug1.0_6470.1_52769.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6470.1_52769.t1 atgggaaaagtggccttgacctttaacctaccgaccgaaagttctcctcttggaagagagacaggagctggtaaatcctc ctttatcaacctgatcctgggatgtgagctactgccgtactccttacttagtaataccaacaccatttgtgagatccagt atggtgatcaacataatgtgatccttcatccccacgagtacagccggcggacggaacaaattaactgtgaaagcttctct gaactacaggctattcttaaagagaagatccagaaaaatgagaatggaacagatctccagaaaaacaagaatatgacgga acagatcatgtataaaagggctgaaatattcttaccaaatgatcttctacaggtacaaccaggtgagagggaggctgtca agaaggacaccatagacaagctgactggatcctccactggctggccaggctgtcaggagtcacagatctacacgctatct acacgtgaagccagcttcatacagaacactcccgacaagtttgtggtcggacagtttgcttgcttgttaaaagagatcat gaaactggtgccaaaaagtagagagatcttactcactaaatctataaggttggtgaagcaagttgttgacaaatctttgt ttatcattgatcacaaccttagtgacgcaaagcttcctccagaggagaaaggtagacggactgtaaccacgattgacaat ctcgctgagctaaagagtgaggtcaaggacagaatttgtaatgtgtcagagtatgagatagatgatacaaaagaatggaa agaagtcacagtcatgattcgctctttactctacgataaaatagcagcagaaattcagaggtgggaagcaaaatcacatg agcttgagagacttggacaagagacctctgagagattcatgcagaaatttcctgattttgaccataaacttcaccttgtt gagcaaaaattccaaagtggtaaaagtggagaccattccgcagcattacccacagatgaagtgccattcgtacctatgaa tatcacaaggaagtttgacaatctaaatataggatttaaagtccttattggagttacttttgccccggtgttccttatcg gtgcccttgtacgcctgccagtgtggggcgtcaaggaactaaaacgcaagattgacagtgtgatgctggagaaagattat gggtcagacaggattaaagccatgagaaagtatgcagagagtaccttaaattctacaacagatccctacaaaatgaggcc agttttagaggaggaggtacaacctctgctccaatacctagaacaacagcgcctcaaagtgctgaatctcattgatgttg acatagccataattgagaaaaagaaggaggacctacgtagacgtgagtcgatcatagagtcatacagtcatttgagggga aactttagggagcacagaagagaaattttgtatttctataaaatgaaaatgcccgtgccttcaaactttattagcaatga ctgtattcaagatgttgagaaagtgtctggaggaattgttcaggagatctttaaaggcactatgaccagtatatgtatat caggacttgatgactcacacaaacatgtgatcataaggaagaataaatttgacatacggaaggacaacattcttggttat ctgaaggaggaagaagcatacagtaatcgtagatttgtacatcatctaccctgcttgggatttgttcgccaagacacaag gatttggcaggtgctcaccatgcatgactgcacactaagggagttcctccagaagacttgtgtgggtcagggcaaaccta agcaccacaccctgtatacttgtatggaccaagtggtcagtggcctggagtttctccacaggaaagacctggtccatatt gacctctctctggacaccatcctggtagacagtgatacaaagatacgactcatcaacgtcaattctccatgtaagctgcc ggcagagttacttccccataagagcaccagtatcttgccgtatgcacactttcaccccaatatcctgatggatcctgaat ccaatgtttacagatcgctacatgacatgtacagtgtcggtattataatgtgggagaactatgaccaagtgaatgtaaat gtgaaatataaaggctttatcaccattcagagttattaccagttgaatgtaaatgtgaaatataaaggctctatcaccat tcagagttatgaccaagtgaatagttatgaccaagtgaatgttaatgtaaaatataaaggctctatcaccattcagagtt atgaccgtgtgaatgtgaaatataaaggctctcagagttatgaccatgtgaatattaatgtcaaatataaagggtctatc accattcagagttatgaccaagtgaagtaa |
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Protein
| Protein ID | pfu_aug1.0_6470.1_52769.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6470.1_52769.t1 MGKVALTFNLPTESSPLGRETGAGKSSFINLILGCELLPYSLLSNTNTICEIQYGDQHNVILHPHEYSRRTEQINCESFS ELQAILKEKIQKNENGTDLQKNKNMTEQIMYKRAEIFLPNDLLQVQPGEREAVKKDTIDKLTGSSTGWPGCQESQIYTLS TREASFIQNTPDKFVVGQFACLLKEIMKLVPKSREILLTKSIRLVKQVVDKSLFIIDHNLSDAKLPPEEKGRRTVTTIDN LAELKSEVKDRICNVSEYEIDDTKEWKEVTVMIRSLLYDKIAAEIQRWEAKSHELERLGQETSERFMQKFPDFDHKLHLV EQKFQSGKSGDHSAALPTDEVPFVPMNITRKFDNLNIGFKVLIGVTFAPVFLIGALVRLPVWGVKELKRKIDSVMLEKDY GSDRIKAMRKYAESTLNSTTDPYKMRPVLEEEVQPLLQYLEQQRLKVLNLIDVDIAIIEKKKEDLRRRESIIESYSHLRG NFREHRREILYFYKMKMPVPSNFISNDCIQDVEKVSGGIVQEIFKGTMTSICISGLDDSHKHVIIRKNKFDIRKDNILGY LKEEEAYSNRRFVHHLPCLGFVRQDTRIWQVLTMHDCTLREFLQKTCVGQGKPKHHTLYTCMDQVVSGLEFLHRKDLVHI DLSLDTILVDSDTKIRLINVNSPCKLPAELLPHKSTSILPYAHFHPNILMDPESNVYRSLHDMYSVGIIMWENYDQVNVN VKYKGFITIQSYYQLNVNVKYKGSITIQSYDQVNSYDQVNVNVKYKGSITIQSYDRVNVKYKGSQSYDHVNINVKYKGSI TIQSYDQVK |
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