Gene
| Gene Model ID | pfu_aug1.0_6473.1_52771 |
|---|---|
| Locus | scaffold6473.1 : 66 ... 10852 : + |
| To GenomeBrowser | scaffold6473.1:66..10852 |
| Genes list of scaffold | scaffold6473.1 |
| Synonym | pfu_aug2.0_1305.1_18246 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6473.1_52771.t1 | 1 | 1 | HSP70 | 5 | 608 | 0.0 | 890.6 | 0.0 | 0.0 | 890.5 |
| pfu_aug1.0_6473.1_52771.t1 | 2 | 1 | MreB_Mbl | 5 | 28 | 7.5e-16 | 57.6 | 0.017 | 32.0 | 2.9 |
| pfu_aug1.0_6473.1_52771.t1 | 2 | 2 | MreB_Mbl | 126 | 374 | 7.5e-16 | 57.6 | 1.5e-17 | 2.8e-14 | 52.4 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| adductorMuscle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_6473.1_52771.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6473.1_52771.t1 atggccatgccagcaatcgggattgatttgggaacaacttattcctgtgttgcaatttttcaacatggtaaagttgaaat catcgcaaacgaccagggaaatagaacgacgccaagctatgtggcctttacagatacggagagattgatcggagatgcgg caaaaaatcaagtggctttgaacgctcaaaatacggtgttcgatgcaaagcggctgatcgggaggaaattcgacgatgat tccgtgaaaagtgacatgaaacactggccgttcaaaataatcaacaagggaggtcgaccaatgatccaggtggagtacaa gggagagcagaaacaattcagtgcagaggagattagttcaatggtgttgaccaaaatgaaggacacagcagagacttact tgggcaaaaaggtcaaggacgccgttgtcaccgtccctgcgtacttcaatgactcgcaacgtcaggcgaccaaagatgcc ggagccatctctggacttaacgttttacggatcattaacgagccgaccgctgccgcccttgcctacggactcgacaaaaa tctgagcggagagaaaaacgtattgatttatgatttgggcggcggtactttcgatgtttcgattctgaccatcgaccagg gatcgatgtttgaggtgcgatctaccgctggcgatacgcatctcggtggtgaggacttcgataatcggatggtgaatttc ttcgtgcaggaatttaagaggaaacataagaaggatatctccagcaataatcgggcactgagacggctgagatcatcgtg cgagcgggcaaagagaacactgtcaagcagctcagaggcaagtctcgaaatcgattctttattcgaaggcattgattttt acacgaaaatatcacgcgccagatttgaagagctatgctcagatttgtttcgcagtacaatggaaccagtagagagggcg ctggtagacgcgaaactggacaagtcgaaaattcacgatgtagtccttgttggcggatcgacccgaatcccaaagattca gaagcttcttcaagaattcatgggcggaagagaattgaataaatcgattaaccccgacgaggccgtggcgtacggtgctg cggtacaggccgccatcttgaccggagatacgcacgaaacgatcaaagacgtactgctggtggacgtggcgcctctatcg ctcggcatcgaaactgccggtggagtaatgacaaaactgatagaacgaaatagccgtatcccgtgtaaaatgagcaaaac tttcaccacatacgcagacaaccaacctggggtgcatattcaggttttcgagggcgagagagccatgacaaaagacaacc attctttaggaacatttgatttgaacggcatacccccagcaccaagaggggttccgcagatagacgttacttttgatatt gacgcaaacggaattttgaatgtttccgccgtcgacaagagcaccggaaagacgaatcagatcactataacaaatgacaa aggtcgattaagcaagaccgagatcgatagaatggtaaacgacgccgagaaatacaaacaagaagatgatcttcagcgcg aaaaaataacggcgcggaatcaattagaaaactacgcattcagtgtacgaatggcggtaaacgaatctggcgacaaactg cagcagagtgacaaagatacggcactcaaaaagtgtgaggaggtgctccagtggctggaatccaactccctggccgagaa ggatgaaattgaccaccaaatgaaggagcttcagggcacctgttcaccaatcatgtccaagcttcacggcggtcaaggtg gcgccaccggtcagagcgggggatcgtccggcggaccntaccgttga |
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Protein
| Protein ID | pfu_aug1.0_6473.1_52771.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6473.1_52771.t1 MAMPAIGIDLGTTYSCVAIFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNAQNTVFDAKRLIGRKFDDD SVKSDMKHWPFKIINKGGRPMIQVEYKGEQKQFSAEEISSMVLTKMKDTAETYLGKKVKDAVVTVPAYFNDSQRQATKDA GAISGLNVLRIINEPTAAALAYGLDKNLSGEKNVLIYDLGGGTFDVSILTIDQGSMFEVRSTAGDTHLGGEDFDNRMVNF FVQEFKRKHKKDISSNNRALRRLRSSCERAKRTLSSSSEASLEIDSLFEGIDFYTKISRARFEELCSDLFRSTMEPVERA LVDAKLDKSKIHDVVLVGGSTRIPKIQKLLQEFMGGRELNKSINPDEAVAYGAAVQAAILTGDTHETIKDVLLVDVAPLS LGIETAGGVMTKLIERNSRIPCKMSKTFTTYADNQPGVHIQVFEGERAMTKDNHSLGTFDLNGIPPAPRGVPQIDVTFDI DANGILNVSAVDKSTGKTNQITITNDKGRLSKTEIDRMVNDAEKYKQEDDLQREKITARNQLENYAFSVRMAVNESGDKL QQSDKDTALKKCEEVLQWLESNSLAEKDEIDHQMKELQGTCSPIMSKLHGGQGGATGQSGGSSGGXYR |
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