Gene
| Gene Model ID | pfu_aug1.0_6473.1_52772 |
|---|---|
| Locus | scaffold6473.1 : 11386 ... 19778 : + |
| To GenomeBrowser | scaffold6473.1:11386..19778 |
| Genes list of scaffold | scaffold6473.1 |
| Synonym | pfu_aug2.0_1305.1_18247 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6473.1_52772.t1 | 5 | 1 | LRR_6 | 49 | 68 | 8.5e-13 | 46.9 | 2.3e-05 | 0.028 | 14.4 |
| pfu_aug1.0_6473.1_52772.t1 | 5 | 1 | LRR_1 | 49 | 61 | 2.0e-07 | 30.0 | 0.0031 | 3.8 | 7.8 |
| pfu_aug1.0_6473.1_52772.t1 | 4 | 1 | LRR_4 | 50 | 85 | 1.9e-06 | 27.3 | 0.0008 | 0.98 | 9.1 |
| pfu_aug1.0_6473.1_52772.t1 | 4 | 2 | LRR_4 | 76 | 115 | 1.9e-06 | 27.3 | 5.7e-06 | 0.007 | 15.9 |
| pfu_aug1.0_6473.1_52772.t1 | 5 | 2 | LRR_6 | 77 | 87 | 8.5e-13 | 46.9 | 0.37 | 460.0 | 1.4 |
| pfu_aug1.0_6473.1_52772.t1 | 5 | 2 | LRR_1 | 77 | 88 | 2.0e-07 | 30.0 | 0.11 | 140.0 | 3.1 |
| pfu_aug1.0_6473.1_52772.t1 | 5 | 3 | LRR_6 | 102 | 123 | 8.5e-13 | 46.9 | 0.00011 | 0.14 | 12.2 |
| pfu_aug1.0_6473.1_52772.t1 | 5 | 3 | LRR_1 | 104 | 116 | 2.0e-07 | 30.0 | 0.0018 | 2.3 | 8.5 |
| pfu_aug1.0_6473.1_52772.t1 | 5 | 4 | LRR_6 | 130 | 152 | 8.5e-13 | 46.9 | 1.1e-06 | 0.0013 | 18.5 |
| pfu_aug1.0_6473.1_52772.t1 | 5 | 4 | LRR_1 | 133 | 144 | 2.0e-07 | 30.0 | 0.045 | 55.0 | 4.3 |
| pfu_aug1.0_6473.1_52772.t1 | 4 | 3 | LRR_4 | 133 | 171 | 1.9e-06 | 27.3 | 0.00082 | 1.0 | 9.0 |
| pfu_aug1.0_6473.1_52772.t1 | 5 | 5 | LRR_6 | 160 | 172 | 8.5e-13 | 46.9 | 0.099 | 120.0 | 3.2 |
| pfu_aug1.0_6473.1_52772.t1 | 4 | 4 | LRR_4 | 160 | 193 | 1.9e-06 | 27.3 | 0.057 | 71.0 | 3.1 |
| pfu_aug1.0_6473.1_52772.t1 | 5 | 5 | LRR_1 | 161 | 172 | 2.0e-07 | 30.0 | 0.066 | 81.0 | 3.8 |
Transcript
| Transcript ID | pfu_aug1.0_6473.1_52772.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6473.1_52772.t1 atgcacctttccgtgtttcctgtccccctctctggatccacccctgctatagatcgcttacagatacagattctgcagca ttgctgtattaattctgaaacattaggggttctagcctcggctctggtacaggttgactctgccatcacacatctggacc tttcagacaatgatatatcagacagggacaccagggttttatcacagattttcgagagttctcggtacttaaaagtcctt tgtttggaccataattgcttggaacgaaggaatcttagacttgttggtgaatctattggatgtaataaaagtttaaggga actgaatttgtcatggaatcacattcgcctgactggggcagtggatatcctgaaaggaatgaaggacaatcgccatatta caaagcttgacctttcctggaatggtcttggttttgagggatgcgtggctctttccgaggttcttgctgataacgttact cttacagaactcaatgttacctgcaacaggatccaccctccggccatgctggagatggtgaaagggctggcgagcaataa aactcttaaagttctagacaatatagtggtcaatgacgagtttatgacactttatgaagacatcaaatcaaaacgcgatt ttaaggagtcggggattccagttacaactatggtcattgaaaagattataaactttatggataaaaacaacgatggctct attgatataagtgaatttctcgaaggagataagaaaattcgaaaaatatcacgtgaccatgccaaggaccagcaccaaca gaaagccagtgacaactatgctaggtattcaaggtcgttcaaacaaggacaaatagatcctatgacgtttagattacggg tcgatgaggtcaacaataaactgccggttattgaatctcgcaatcccagcccgatgtccgataggaaaatgtctctcata agcaactataacgttaacgaggatgattag |
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Protein
| Protein ID | pfu_aug1.0_6473.1_52772.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6473.1_52772.t1 MHLSVFPVPLSGSTPAIDRLQIQILQHCCINSETLGVLASALVQVDSAITHLDLSDNDISDRDTRVLSQIFESSRYLKVL CLDHNCLERRNLRLVGESIGCNKSLRELNLSWNHIRLTGAVDILKGMKDNRHITKLDLSWNGLGFEGCVALSEVLADNVT LTELNVTCNRIHPPAMLEMVKGLASNKTLKVLDNIVVNDEFMTLYEDIKSKRDFKESGIPVTTMVIEKIINFMDKNNDGS IDISEFLEGDKKIRKISRDHAKDQHQQKASDNYARYSRSFKQGQIDPMTFRLRVDEVNNKLPVIESRNPSPMSDRKMSLI SNYNVNEDD |
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