Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_6482.1_45438
Locus scaffold6482.1 : 1 ... 15848 : +
To GenomeBrowser scaffold6482.1:1..15848
Genes list of scaffold scaffold6482.1
Synonym pfu_aug2.0_1211.1_04890

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_6482.1_45438.t1 gi|345488930|ref|XP_003426015.1| 0.0

Transcript
Transcript IDpfu_aug1.0_6482.1_45438.t1
Definition-
>pfu_aug1.0_6482.1_45438.t1
atcccacagctggtccctctgccaatgagcaaacatcttggtgtctggacgaatctactctccatgaaaatgtgaagaag
accctcgtcaagttttgtgtaccatcacccattgttttcagtgatgtaaactacctatcggcaacagcacctccagcagc
tgcagaatggcagagtctgttacgacctctccggggacgtgaaccagagggaatgtggaatctactgtccattgtacgag
aaatgtttagaagggatgatagcaatgcaataccactactggaaattattacagatgaagttttacagtgtgaacaggtc
aagttagcgtatcaggaaactgaagtattaactctactaaagaagatcccacttggcaatgctgaactagctgtcctaag
agagaaagcagaagaattaagggatggtatattcaaatccagaggagatgcacttttaccactcacacttgcaagcttta
tatttgactcactgtgtctaccagtatatccagtaggcagtactaatagccggccacccagtagatctgtacagattaca
gccaggacccctgccgatgagaagctaggatttgatggtgctgtagctgcactaggactcaaagccaatgtatctgaagc
tgaacatccattactgtgtgagagtacaagacgacagagaggagaactagctattgccatgcttgttcattataaagatg
atcctcaaaaactcagtagggtcaaattggcttatcaggaaactgaagtattaactctactaaagaaaatcccacttggc
aatgctgaactagctgtccttagagagaaagcagaagaattaagggatggtatattcaaatccagaggcgatgcactttt
accactcacactcgcaagctttatatttgactcactgtgtctaccagtatatccagtaggcagtactaatagccggccac
ccagtagatctgtacagattacagccaggacccctgccgatgagaagctaggatttgacggtgctgtagctgcactagga
ctcaaagccaatgtatctgaagctgaacatccattactttgtgagagcacaagacgacagagaggagaactagctattgc
catgcttgttcattataaagatgatcctcaaaaactgagtaggatcatggataaactactggataaagaaatccatcagc
agtacaaagctccgagccttatgaactatctgggtgtcaaaacatcaaaccattctactcctacttccatgagccaagcc
agttcaccgatccatccctccacaagccaacattcctcgggtggagcaatgggcggagtcaatcccgatacgtcccaacc
ctctgatcccaggcctggaccatccagggtgaagtctgtggaggggtgtggtcagtcccccagtaaagcctactcatcag
gagccagacccaaaatcacatatccccttaggtataatagtggtaaagatacagacagctcagctgtggaggaagaggat
gagttacgggccttggaggccaagctgaaatgtatggctatcaaaaagaaaccatctcaaggtcaagctacagatattgg
cagtactgctattaacattctgattgatacatgggagggacacctgactcctcctgaagtggcctccctggcagataaag
cctccagagggagggacccagccatggttaaagctgcagcagaactagctttgtcttgcctaccacatgcccaggcactc
aatccttcagaagttcagagagctttgtttcagtgtaaggaacagagcagggaaatgcttgagaaggcgtgtctagcagt
tgagagtgctgctaagggaggaggagtatatccagaggttctgtttgatgttgctcgtcagtggtttgagctctctgagg
aagctgccaagtctagtaattgttctgactcacaagccatccgtaataataacgcccaaaaagaccttgatagagcagtt
actagttcccctcttgttgcaggagaaagacagagtccctctgctgttcaaatcttacccattgcatccacaccacctca
ttctaatgcatgtaatcaagtatccagtcaagttattgcccaaagtaccaacccaattccggcacagcccatggtattgt
cctacgccatccctcagtccaaccatcccacactacctcatcagactctagtccagcatataggctatgtccagcaaatc
ccaccattcggccagcagtatccccctcaacacatccccatacatcacagccataacattcatccatacgtcaccttccc
ataccaaggccagccaccttacaataatctacagggactgcctgctgccaccagtatgtaccctccccactctgcccagt
tccgacccctggggccagcagtacaggtgtttccaagtcacagtcattgtcagatgtccagtattcaagctcccccagtg
tcttcatcatcagggtcggcctctcaccaagatgcctcacaagacaacgcatcaaattcccctagtcctcctcaccatgg
agccatacagcatgctggcagtcaggtacagaaccaagcacagcttaactacttaatgatagccttccgagttggtatgc
ttgctctggagaccctggctcgtagggtacatgatgaccgaccccagacaaagtacgccagaaatccaccttatggagaa
gatgtcaagtggctcttaggaattgctataaaattaggaatgaattatctccagcagttctgtgccagtacagtgaatgg
tgtagttagtccttttatcctgtatgacatcgcactagaagcagcccatgttctagccagaaataatccagctattgttc
aaagccatctcagatccaatattctcaatccacttttacaaaaatgtatacaaatgtttactcagtgtgcccaccagcga
attcatcatatcaatcagtcagagtatgaggactttgtcagcatcatgtgcagtgctcgtaacgctttctacctgactcc
cggaggtatcgttcagttccaggaacttttacagagcttacgacgatccaaatcctgtcgtaaagaactctggagtagga
tcgtacatggtctagccgcgccaagaaatgtctga

Protein
Protein IDpfu_aug1.0_6482.1_45438.t1
Definition-
>pfu_aug1.0_6482.1_45438.t1
PTAGPSANEQTSWCLDESTLHENVKKTLVKFCVPSPIVFSDVNYLSATAPPAAAEWQSLLRPLRGREPEGMWNLLSIVRE
MFRRDDSNAIPLLEIITDEVLQCEQVKLAYQETEVLTLLKKIPLGNAELAVLREKAEELRDGIFKSRGDALLPLTLASFI
FDSLCLPVYPVGSTNSRPPSRSVQITARTPADEKLGFDGAVAALGLKANVSEAEHPLLCESTRRQRGELAIAMLVHYKDD
PQKLSRVKLAYQETEVLTLLKKIPLGNAELAVLREKAEELRDGIFKSRGDALLPLTLASFIFDSLCLPVYPVGSTNSRPP
SRSVQITARTPADEKLGFDGAVAALGLKANVSEAEHPLLCESTRRQRGELAIAMLVHYKDDPQKLSRIMDKLLDKEIHQQ
YKAPSLMNYLGVKTSNHSTPTSMSQASSPIHPSTSQHSSGGAMGGVNPDTSQPSDPRPGPSRVKSVEGCGQSPSKAYSSG
ARPKITYPLRYNSGKDTDSSAVEEEDELRALEAKLKCMAIKKKPSQGQATDIGSTAINILIDTWEGHLTPPEVASLADKA
SRGRDPAMVKAAAELALSCLPHAQALNPSEVQRALFQCKEQSREMLEKACLAVESAAKGGGVYPEVLFDVARQWFELSEE
AAKSSNCSDSQAIRNNNAQKDLDRAVTSSPLVAGERQSPSAVQILPIASTPPHSNACNQVSSQVIAQSTNPIPAQPMVLS
YAIPQSNHPTLPHQTLVQHIGYVQQIPPFGQQYPPQHIPIHHSHNIHPYVTFPYQGQPPYNNLQGLPAATSMYPPHSAQF
RPLGPAVQVFPSHSHCQMSSIQAPPVSSSSGSASHQDASQDNASNSPSPPHHGAIQHAGSQVQNQAQLNYLMIAFRVGML
ALETLARRVHDDRPQTKYARNPPYGEDVKWLLGIAIKLGMNYLQQFCASTVNGVVSPFILYDIALEAAHVLARNNPAIVQ
SHLRSNILNPLLQKCIQMFTQCAHQRIHHINQSEYEDFVSIMCSARNAFYLTPGGIVQFQELLQSLRRSKSCRKELWSRI
VHGLAAPRNV

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495