Gene
| Gene Model ID | pfu_aug1.0_6487.1_45441 |
|---|---|
| Locus | scaffold6487.1 : 6966 ... 16727 : + |
| To GenomeBrowser | scaffold6487.1:6966..16727 |
| Genes list of scaffold | scaffold6487.1 |
| Synonym | pfu_aug2.0_2635.1_18880 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6487.1_45441.t1 | 1 | 1 | DSPc | 1 | 107 | 3.8e-37 | 126.8 | 2.0e-40 | 4.8e-37 | 126.4 |
| pfu_aug1.0_6487.1_45441.t1 | 1 | 1 | Y_phosphatase | 36 | 90 | 5.9e-06 | 25.7 | 3.0e-09 | 7.3e-06 | 25.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_6487.1_45441.t1 | gi|92430211|gb|ABE77341.1| | MAP kinase phosphatase-1 [Ctenopharyngodon idella] | 2.0e-36 |
Transcript
| Transcript ID | pfu_aug1.0_6487.1_45441.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6487.1_45441.t1 atgaacgtctccacaaattgtaaaaatcatttcgaggaaaacttcagttatatgaatattcctgtagacgacaacgacag cgcagatctggccgtctggtttccacaaacgatctcgtttatagactcagtgaaggagaaaggaggaaaagtactgcttc attgccaagctggtataagtcgctcggctacagtttgtctggcatacctcatgagttcagccaaagttgatctagagaca gcttttgaacacgttcgatctcgtcgaagtgtcatctctccaaatcttaacttcatgaggcagctacaagtgtacgaaaa agaactagagacatcgaacactctctcaacctcactctctgacgcgtcattggacagtgccatggaaacatcgtctaatg acgtcagcagtggcagttcaggagcccagtccggcaaatcacagagcgcatctagcttttctcaggagccgtcctattct gggggcgcctttgatttctcatttggaacctcgttctcacaagcaacaacacctttgctttcgcccagttaa |
|
Protein
| Protein ID | pfu_aug1.0_6487.1_45441.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6487.1_45441.t1 MNVSTNCKNHFEENFSYMNIPVDDNDSADLAVWFPQTISFIDSVKEKGGKVLLHCQAGISRSATVCLAYLMSSAKVDLET AFEHVRSRRSVISPNLNFMRQLQVYEKELETSNTLSTSLSDASLDSAMETSSNDVSSGSSGAQSGKSQSASSFSQEPSYS GGAFDFSFGTSFSQATTPLLSPS |
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