Gene
Gene Model ID | pfu_aug1.0_65.1_07343 |
---|---|
Locus | scaffold65.1 : 48186 ... 53158 : + |
To GenomeBrowser | scaffold65.1:48186..53158 |
Genes list of scaffold | scaffold65.1 |
Synonym | pfu_aug2.0_1272.1_08295 |
Manual annotation
Study field | Environmental Response |
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Gene name | hypothetical protein |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_65.1_07343.t1 | 1 | 1 | 7tm_1 | 1 | 318 | 1.7e-36 | 125.6 | 1.4e-40 | 2.1e-36 | 125.3 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_65.1_07343.t1 | gi|157107208|ref|XP_001649674.1| | 2.0e-38 |
Transcript
Transcript ID | pfu_aug1.0_65.1_07343.t1 |
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Definition | - |
>pfu_aug1.0_65.1_07343.t1 atgtgtaaagtgtattattttgtatggaacctcagctacacagcctctatcatcattttaactgctattgccacagagcg atatatagccataaagtttccattacgagcccgccgctgtctcacaacccgccgcttgacgctgtctcagataggcatct ggttgatagcggctatttacaatatcccatatctcattgtatttgataccattccgatcaaggacggaacaaaagatgta gaattttgtttttatctttacgacattatagacatgaaaactttgacaacgctgaattttgttgtttggtatgtaatccc acttttgtccatgctcattatgtattccaatatcggaagagccttatggagaactgggtcgacaccaaaccatcaaagaa gactaaattctgagaatattgacgaatcactttgtacaaatagttcaaacagttccgattgtcccaatcataatatcaac ttgaaagaattaaacaagaaagaaaacattcttcaaggaagtgacaaagtctcgttcaaaatattacgccgcaatgatca tatatgtgcacattgtgctagtcagcgaggaaagagtgatggaaacggaaatggggtatctattaacggaaacgattcca gctcgactcagagacgatcaatccttattggcatcactagcggacgcgaaggaagcttatcaacacgacatcgaatgaat agttccaatacaagtcagatcagaatgagctcaacaagggccattagaagcagaaggaaagtcatcagacttcttgtcgc cgttgtggtatcgtttgccttatgtgtacttcctcatcacatacgacttcttttcatctactggaatattacatctccga taaacgccggactgtttccgcctttatcgtttcttattctttatttcaatagcgcacttaatcctgttttgtatgcgcta ttttctgcaaactttcgaaaaagtttcagagaaatactgccttgtaaatttcgtagaagaccattatcgtttcttatgct ggacactaaaagtgagggctatcggtaa |
Protein
Protein ID | pfu_aug1.0_65.1_07343.t1 |
---|---|
Definition | - |
>pfu_aug1.0_65.1_07343.t1 MCKVYYFVWNLSYTASIIILTAIATERYIAIKFPLRARRCLTTRRLTLSQIGIWLIAAIYNIPYLIVFDTIPIKDGTKDV EFCFYLYDIIDMKTLTTLNFVVWYVIPLLSMLIMYSNIGRALWRTGSTPNHQRRLNSENIDESLCTNSSNSSDCPNHNIN LKELNKKENILQGSDKVSFKILRRNDHICAHCASQRGKSDGNGNGVSINGNDSSSTQRRSILIGITSGREGSLSTRHRMN SSNTSQIRMSSTRAIRSRRKVIRLLVAVVVSFALCVLPHHIRLLFIYWNITSPINAGLFPPLSFLILYFNSALNPVLYAL FSANFRKSFREILPCKFRRRPLSFLMLDTKSEGYR |