Gene
| Gene Model ID | pfu_aug1.0_65.1_07343 |
|---|---|
| Locus | scaffold65.1 : 48186 ... 53158 : + |
| To GenomeBrowser | scaffold65.1:48186..53158 |
| Genes list of scaffold | scaffold65.1 |
| Synonym | pfu_aug2.0_1272.1_08295 |
Manual annotation
| Study field | Environmental Response |
|---|---|
| Gene name | hypothetical protein |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_65.1_07343.t1 | 1 | 1 | 7tm_1 | 1 | 318 | 1.7e-36 | 125.6 | 1.4e-40 | 2.1e-36 | 125.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_65.1_07343.t1 | gi|157107208|ref|XP_001649674.1| | 2.0e-38 |
Transcript
| Transcript ID | pfu_aug1.0_65.1_07343.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_65.1_07343.t1 atgtgtaaagtgtattattttgtatggaacctcagctacacagcctctatcatcattttaactgctattgccacagagcg atatatagccataaagtttccattacgagcccgccgctgtctcacaacccgccgcttgacgctgtctcagataggcatct ggttgatagcggctatttacaatatcccatatctcattgtatttgataccattccgatcaaggacggaacaaaagatgta gaattttgtttttatctttacgacattatagacatgaaaactttgacaacgctgaattttgttgtttggtatgtaatccc acttttgtccatgctcattatgtattccaatatcggaagagccttatggagaactgggtcgacaccaaaccatcaaagaa gactaaattctgagaatattgacgaatcactttgtacaaatagttcaaacagttccgattgtcccaatcataatatcaac ttgaaagaattaaacaagaaagaaaacattcttcaaggaagtgacaaagtctcgttcaaaatattacgccgcaatgatca tatatgtgcacattgtgctagtcagcgaggaaagagtgatggaaacggaaatggggtatctattaacggaaacgattcca gctcgactcagagacgatcaatccttattggcatcactagcggacgcgaaggaagcttatcaacacgacatcgaatgaat agttccaatacaagtcagatcagaatgagctcaacaagggccattagaagcagaaggaaagtcatcagacttcttgtcgc cgttgtggtatcgtttgccttatgtgtacttcctcatcacatacgacttcttttcatctactggaatattacatctccga taaacgccggactgtttccgcctttatcgtttcttattctttatttcaatagcgcacttaatcctgttttgtatgcgcta ttttctgcaaactttcgaaaaagtttcagagaaatactgccttgtaaatttcgtagaagaccattatcgtttcttatgct ggacactaaaagtgagggctatcggtaa |
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Protein
| Protein ID | pfu_aug1.0_65.1_07343.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_65.1_07343.t1 MCKVYYFVWNLSYTASIIILTAIATERYIAIKFPLRARRCLTTRRLTLSQIGIWLIAAIYNIPYLIVFDTIPIKDGTKDV EFCFYLYDIIDMKTLTTLNFVVWYVIPLLSMLIMYSNIGRALWRTGSTPNHQRRLNSENIDESLCTNSSNSSDCPNHNIN LKELNKKENILQGSDKVSFKILRRNDHICAHCASQRGKSDGNGNGVSINGNDSSSTQRRSILIGITSGREGSLSTRHRMN SSNTSQIRMSSTRAIRSRRKVIRLLVAVVVSFALCVLPHHIRLLFIYWNITSPINAGLFPPLSFLILYFNSALNPVLYAL FSANFRKSFREILPCKFRRRPLSFLMLDTKSEGYR |
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