Gene
| Gene Model ID | pfu_aug1.0_6506.1_31215 |
|---|---|
| Locus | scaffold6506.1 : 1 ... 11362 : + |
| To GenomeBrowser | scaffold6506.1:1..11362 |
| Genes list of scaffold | scaffold6506.1 |
| Synonym | NA |
Manual annotation
| Study field | Reproduction |
|---|---|
| Gene name | C1q domain containing protein |
| Description | Gapped. Best hit to MgC1q36. 66 bits, 4e-11 |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6506.1_31215.t1 | 1 | 1 | C1q | 35 | 148 | 8.0e-20 | 71.1 | 6.3e-24 | 9.4e-20 | 70.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_6506.1_31215.t1 | gi|343455237|gb|AEM36058.1| | putative sialic acid binding lectin [Mytilus edulis] | 2.0e-13 |
Transcript
| Transcript ID | pfu_aug1.0_6506.1_31215.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6506.1_31215.t1 ttcgccgattactcatgggtagcagttctccgtctcccactgtgatacctaaacaaaacagcataggtttctttgcatac aacccaagctttcaacaaaacctcggtattcatcagacagtggagttccctactgcccttacaaatgaaggatcagctta tagtaccttacatagcatctttagagctcctgtagacggtctttactttttctccgtcaccataatgagttttcttcggg aggatatattggtagagatagtacataatggtaacggtatggcgtacacgtactctggaagtgggacaatttacggatca ggatcaacatcagctgtacttaaactccatgccaacgacgatgtttggataagaattcttgacaacgctcttaatgatgg taacatcagagtctatgcaaacaaatggtcttcgttctgtggattcaaaatcgtataa |
|
Protein
| Protein ID | pfu_aug1.0_6506.1_31215.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6506.1_31215.t1 RRLLMGSSSPSPTVIPKQNSIGFFAYNPSFQQNLGIHQTVEFPTALTNEGSAYSTLHSIFRAPVDGLYFFSVTIMSFLRE DILVEIVHNGNGMAYTYSGSGTIYGSGSTSAVLKLHANDDVWIRILDNALNDGNIRVYANKWSSFCGFKIV |
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