Gene
Gene Model ID | pfu_aug1.0_6506.1_31215 |
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Locus | scaffold6506.1 : 1 ... 11362 : + |
To GenomeBrowser | scaffold6506.1:1..11362 |
Genes list of scaffold | scaffold6506.1 |
Synonym | NA |
Manual annotation
Study field | Reproduction |
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Gene name | C1q domain containing protein |
Description | Gapped. Best hit to MgC1q36. 66 bits, 4e-11 |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_6506.1_31215.t1 | 1 | 1 | C1q | 35 | 148 | 8.0e-20 | 71.1 | 6.3e-24 | 9.4e-20 | 70.8 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_6506.1_31215.t1 | gi|343455237|gb|AEM36058.1| | putative sialic acid binding lectin [Mytilus edulis] | 2.0e-13 |
Transcript
Transcript ID | pfu_aug1.0_6506.1_31215.t1 |
---|---|
Definition | - |
>pfu_aug1.0_6506.1_31215.t1 ttcgccgattactcatgggtagcagttctccgtctcccactgtgatacctaaacaaaacagcataggtttctttgcatac aacccaagctttcaacaaaacctcggtattcatcagacagtggagttccctactgcccttacaaatgaaggatcagctta tagtaccttacatagcatctttagagctcctgtagacggtctttactttttctccgtcaccataatgagttttcttcggg aggatatattggtagagatagtacataatggtaacggtatggcgtacacgtactctggaagtgggacaatttacggatca ggatcaacatcagctgtacttaaactccatgccaacgacgatgtttggataagaattcttgacaacgctcttaatgatgg taacatcagagtctatgcaaacaaatggtcttcgttctgtggattcaaaatcgtataa |
Protein
Protein ID | pfu_aug1.0_6506.1_31215.t1 |
---|---|
Definition | - |
>pfu_aug1.0_6506.1_31215.t1 RRLLMGSSSPSPTVIPKQNSIGFFAYNPSFQQNLGIHQTVEFPTALTNEGSAYSTLHSIFRAPVDGLYFFSVTIMSFLRE DILVEIVHNGNGMAYTYSGSGTIYGSGSTSAVLKLHANDDVWIRILDNALNDGNIRVYANKWSSFCGFKIV |