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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_651.1_50995
Locus scaffold651.1 : 21838 ... 34465 : -
To GenomeBrowser scaffold651.1:21838..34465
Genes list of scaffold scaffold651.1
Synonym pfu_aug2.0_4539.1_32679

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_651.1_50995.t1 1 1 p450 38 482 0.0 319.1 0.0 0.0 318.8

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
>Adult tissues
adductorMuscle 1
mantle 1

Transcript
Transcript IDpfu_aug1.0_651.1_50995.t1
Definition-
>pfu_aug1.0_651.1_50995.t1
atggagcttttggatgttgtaaaggaatttttcagtctccagacagtggctgttgggttcttcattggtttattaacata
tcagttatacaataaactgaagtacaagtcaccaccaggaccatggtcacttcctctcataggaaattacaaacttgcta
ccagtaacaccttacacagagatgttgccgagctttcaataacatataattctcctgtggtacaggttgcaatgggccca
tcgaaagcagtattcctgaacagtttggatgttgtcattgaggcaatggttaaaaagaagtcagactttgctgacagacc
aagaactaaatcgggagacatgttttccgatggtggaaaaggtattgcgtttagtccctatagtgccacgtggaaatttc
agaagaaagtagcaggtaaagcattgagatactacatgcttggaagtcgcctcgaggacatggtcaatgatgtatgtggg
aaaatctttgagaggatgtcacaggaaaaggaacctttttacgtgaatgaatacaccggcaaaatcgttattcacatgct
ctttaacatgtgctttggccaaaaatgcgatctggatagtaaagatgtagcaaggattctgaagctcgatgaagagatag
tagagagatttaattcaggatttatcgaggacctaattcctggcattacatacgtttataaaaccaagaaatggcgagaa
ctggaggaccttgctgatgaattgttgacattcatcagaaaggaagtacagaaacataaggacacatttgaggaaagtaa
cattcgagactatacagatagtatcctcatggcaagagcggaagctgaaacacaggaacgggaagaggatgtagccatgt
tgacagatgtttacatcgtacaaattatcgctgatattttcctaggtggccttgaaacaacgatgatgacactcgattgg
tttatggcatttatggtagcctttcctgagtatcaagaacaatgtcaagcagagattgatcaagctttaggcaaaggtaa
atctccaagtgcatcagatagaaataacctttgcttcacagaagcctgcatgatggagactatgagaaagggatctgttg
ccgctattggcataccacattatacaatttgcgactctagtgtagggggctttgatattccaaaaggaacaatggttttc
aataattactgggctctccataatgattcaaacttctggaaagatgtggataagtttgatccataccgcttcttgacaaa
ggacggcaaaatggacatgaaacctgaaagctggctgcccttttctgctggtagacgagtctgtctaggggaacctgtag
ccagaacagagctgttgctcatagctgcaaatatgttacagaacttcaactttaaaacatcatctggtgtcaagcataaa
gtgacgacgaagtttaatgctccaggaaacgagcttccagaacctcataaggttataatcgagaaaagaaattaa

Protein
Protein IDpfu_aug1.0_651.1_50995.t1
Definition-
>pfu_aug1.0_651.1_50995.t1
MELLDVVKEFFSLQTVAVGFFIGLLTYQLYNKLKYKSPPGPWSLPLIGNYKLATSNTLHRDVAELSITYNSPVVQVAMGP
SKAVFLNSLDVVIEAMVKKKSDFADRPRTKSGDMFSDGGKGIAFSPYSATWKFQKKVAGKALRYYMLGSRLEDMVNDVCG
KIFERMSQEKEPFYVNEYTGKIVIHMLFNMCFGQKCDLDSKDVARILKLDEEIVERFNSGFIEDLIPGITYVYKTKKWRE
LEDLADELLTFIRKEVQKHKDTFEESNIRDYTDSILMARAEAETQEREEDVAMLTDVYIVQIIADIFLGGLETTMMTLDW
FMAFMVAFPEYQEQCQAEIDQALGKGKSPSASDRNNLCFTEACMMETMRKGSVAAIGIPHYTICDSSVGGFDIPKGTMVF
NNYWALHNDSNFWKDVDKFDPYRFLTKDGKMDMKPESWLPFSAGRRVCLGEPVARTELLLIAANMLQNFNFKTSSGVKHK
VTTKFNAPGNELPEPHKVIIEKRN

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