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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_6523.1_45459
Locus scaffold6523.1 : 20836 ... 23288 : +
To GenomeBrowser scaffold6523.1:20836..23288
Genes list of scaffold scaffold6523.1
Synonym pfu_aug2.0_2.1_06701

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_6523.1_45459.t1 1 1 DUF563 141 370 1.2e-25 90.6 1.1e-29 1.6e-25 90.2

Transcript
Transcript IDpfu_aug1.0_6523.1_45459.t1
Definition-
>pfu_aug1.0_6523.1_45459.t1
atggttactcataattccagaagcagcgaatacgatctatatctgcaagacgaaagcaaattcctcactttttcttctca
agaaaaatcatattgtaatggctcattagttccgttaaataacggcggtatttttattcgaaatcttatcctggatccga
ccatgtcatataaatcacgtgtacatggaggcgaaagcctatttgactttttcgagctgaatgagattgaggagtacttc
cagtttcgaaagggatattttcaactcctgtgccgagagagacccacacttcatagcaaaagtaaaagtctaatttcaaa
aggtatggaggcaatacgatatctagataaaagggattcgacaaagcttgttaaagtagaaaattcaccgactttgatga
ttgagagaatagaatacagtaatttgtaccatgcaatgacagaatggtataatgtgtttattgtgttagaagaattgaac
ttaaaagatcatgcggtgaatattctctttgtggataaacacccgagaagcattttagatgatgtctggaaacggttgtt
taggagaatagaatttgctgacaaattgtcttcaaaccaacgttttgttcatgctttctggatgccatctgcatataaaa
gtgcaatgaataaccacaaactggtaaacttgccgtatgtagaacacttcagatccttttttctttataatttcggtttc
aatgacgagataagtacggatttggagatgattaatattacatttatatggcgcagggactttgtatttcatgcaagaaa
tcaaaatggaactatacaaaggaaattcgcgaatgaagaaacactcttacttgcgacaaagagggctttcccatctttta
acgtcattggtatacagcttgagaaactttcttttactgatcaactacgattgataactggtaccagtattttaatagct
atgcatggtgcaggacttgcgcatgtcttattcttgccacgtggttccggtgtctttgaaatattcccaaagtatgtcaa
ctcagcagggaatggacattttcgtgctatggcaagatggaggaaacttcattatgtgtcatggaggaactaccaaagca
gaaacgaagaagaaaatttcaaaactcgtatacctcaagaaatagttttaaactatatcaaaatactgtattggaaaatg
tttaaaaaagaaataccatatgcaaaactagtttaa

Protein
Protein IDpfu_aug1.0_6523.1_45459.t1
Definition-
>pfu_aug1.0_6523.1_45459.t1
MVTHNSRSSEYDLYLQDESKFLTFSSQEKSYCNGSLVPLNNGGIFIRNLILDPTMSYKSRVHGGESLFDFFELNEIEEYF
QFRKGYFQLLCRERPTLHSKSKSLISKGMEAIRYLDKRDSTKLVKVENSPTLMIERIEYSNLYHAMTEWYNVFIVLEELN
LKDHAVNILFVDKHPRSILDDVWKRLFRRIEFADKLSSNQRFVHAFWMPSAYKSAMNNHKLVNLPYVEHFRSFFLYNFGF
NDEISTDLEMINITFIWRRDFVFHARNQNGTIQRKFANEETLLLATKRAFPSFNVIGIQLEKLSFTDQLRLITGTSILIA
MHGAGLAHVLFLPRGSGVFEIFPKYVNSAGNGHFRAMARWRKLHYVSWRNYQSRNEEENFKTRIPQEIVLNYIKILYWKM
FKKEIPYAKLV

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