Gene
| Gene Model ID | pfu_aug1.0_6530.1_31227 |
|---|---|
| Locus | scaffold6530.1 : 301 ... 6928 : + |
| To GenomeBrowser | scaffold6530.1:301..6928 |
| Genes list of scaffold | scaffold6530.1 |
| Synonym | pfu_aug2.0_235.1_17159 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6530.1_31227.t1 | 1 | 1 | MAPEG | 1 | 119 | 1.3e-21 | 76.5 | 9.9e-26 | 1.5e-21 | 76.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_6530.1_31227.t1 | gi|148745064|gb|AAI42536.1| | MGST1 protein [Bos taurus] | 5.0e-29 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_6530.1_31227.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6530.1_31227.t1 atgatggccttaagtttctggacaactaagcacagatttgaacagggtgtttttgcgaacgaagaagactgtgcagcatt tcctaattctaagcttacaacaagcaaccctgttattgaacgggttagaagatgccaccttaatgacctggaaaacatcg taccctttgctctgttgggatcaatgtactgtatgacaggaccagacgaatggtgggccttacttcacttccggatgttc tttgcttcccgccttttacacacaatttgctatttgacaccaatacgtcagccgtccagagctcttatgtttgttattgg cacggcaataaatatttcgatgggcgtggccatcatcaaagcaggaaaatactga |
|
Protein
| Protein ID | pfu_aug1.0_6530.1_31227.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6530.1_31227.t1 MMALSFWTTKHRFEQGVFANEEDCAAFPNSKLTTSNPVIERVRRCHLNDLENIVPFALLGSMYCMTGPDEWWALLHFRMF FASRLLHTICYLTPIRQPSRALMFVIGTAINISMGVAIIKAGKY |
|