Gene
| Gene Model ID | pfu_aug1.0_6530.1_31229 |
|---|---|
| Locus | scaffold6530.1 : 12186 ... 32406 : + |
| To GenomeBrowser | scaffold6530.1:12186..32406 |
| Genes list of scaffold | scaffold6530.1 |
| Synonym | pfu_aug2.0_235.1_17157 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6530.1_31229.t1 | 1 | 1 | MAPEG | 16 | 143 | 5.2e-25 | 87.5 | 8.0e-29 | 5.9e-25 | 87.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_6530.1_31229.t1 | gi|256549338|gb|ACU83223.1| | microsomal glutathione S-transferase [Ruditapes philippinarum] | 5.0e-37 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| >Adult tissues | |
| mantlePallium | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_6530.1_31229.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6530.1_31229.t1 atggcgtcatctctgagtttcgaggatcctatttattcctcgtttgcgttctatgcaactattgttatactgaagatgat ggtaatgagcttactaacgtccagggttcgattgtctaaagggatttttgcgaacgcagaagacggtaaactgcataaag atcccaaagtaaccaccacgcacccggaagtagagagagttagaaggtgtcatcagaacgacattgaaaacatagttcct tttgttcttctggggatcctgtatgtattaaccggaccggatccgtggtgggctgttcttcgtttccgtgtttttgcagc ctctcgtattcttcatactatatgttatcttacaccaataccccagccgtccagggccctgatgtttggtattggactat ctataaatgtacagatggctgtttctgtactgcgtgccatgtaa |
|
Protein
| Protein ID | pfu_aug1.0_6530.1_31229.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6530.1_31229.t1 MASSLSFEDPIYSSFAFYATIVILKMMVMSLLTSRVRLSKGIFANAEDGKLHKDPKVTTTHPEVERVRRCHQNDIENIVP FVLLGILYVLTGPDPWWAVLRFRVFAASRILHTICYLTPIPQPSRALMFGIGLSINVQMAVSVLRAM |
|