Gene
| Gene Model ID | pfu_aug1.0_6531.1_67457 |
|---|---|
| Locus | scaffold6531.1 : 1026 ... 14976 : + |
| To GenomeBrowser | scaffold6531.1:1026..14976 |
| Genes list of scaffold | scaffold6531.1 |
| Synonym | pfu_aug2.0_326.1_20619 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6531.1_67457.t1 | 7 | 1 | zf-H2C2_2 | 600 | 612 | 1.6e-06 | 28.0 | 0.077 | 190.0 | 2.6 |
| pfu_aug1.0_6531.1_67457.t1 | 7 | 1 | zf-C2H2 | 602 | 625 | 2.7e-10 | 39.9 | 0.0025 | 6.3 | 7.3 |
| pfu_aug1.0_6531.1_67457.t1 | 7 | 1 | zf-C2H2_4 | 602 | 622 | 3.3e-06 | 27.0 | 0.12 | 290.0 | 2.1 |
| pfu_aug1.0_6531.1_67457.t1 | 7 | 2 | zf-H2C2_2 | 624 | 644 | 1.6e-06 | 28.0 | 0.19 | 480.0 | 1.3 |
| pfu_aug1.0_6531.1_67457.t1 | 7 | 2 | zf-C2H2 | 635 | 657 | 2.7e-10 | 39.9 | 7.2e-05 | 0.18 | 12.2 |
| pfu_aug1.0_6531.1_67457.t1 | 7 | 2 | zf-C2H2_4 | 635 | 657 | 3.3e-06 | 27.0 | 6.0e-05 | 0.15 | 12.4 |
| pfu_aug1.0_6531.1_67457.t1 | 7 | 3 | zf-H2C2_2 | 649 | 674 | 1.6e-06 | 28.0 | 8.6e-06 | 0.021 | 15.0 |
| pfu_aug1.0_6531.1_67457.t1 | 7 | 3 | zf-C2H2 | 664 | 686 | 2.7e-10 | 39.9 | 0.00036 | 0.9 | 10.0 |
| pfu_aug1.0_6531.1_67457.t1 | 7 | 3 | zf-C2H2_4 | 664 | 683 | 3.3e-06 | 27.0 | 0.0058 | 14.0 | 6.2 |
| pfu_aug1.0_6531.1_67457.t1 | 7 | 4 | zf-H2C2_2 | 678 | 698 | 1.6e-06 | 28.0 | 0.034 | 83.0 | 3.7 |
| pfu_aug1.0_6531.1_67457.t1 | 7 | 4 | zf-C2H2 | 692 | 715 | 2.7e-10 | 39.9 | 0.031 | 77.0 | 3.9 |
| pfu_aug1.0_6531.1_67457.t1 | 7 | 4 | zf-C2H2_4 | 692 | 715 | 3.3e-06 | 27.0 | 0.025 | 61.0 | 4.2 |
| pfu_aug1.0_6531.1_67457.t1 | 7 | 5 | zf-H2C2_2 | 707 | 730 | 1.6e-06 | 28.0 | 0.0051 | 13.0 | 6.3 |
| pfu_aug1.0_6531.1_67457.t1 | 7 | 5 | zf-C2H2 | 721 | 742 | 2.7e-10 | 39.9 | 1.2e-06 | 0.0029 | 17.8 |
| pfu_aug1.0_6531.1_67457.t1 | 7 | 5 | zf-C2H2_4 | 721 | 742 | 3.3e-06 | 27.0 | 0.00023 | 0.58 | 10.6 |
| pfu_aug1.0_6531.1_67457.t1 | 7 | 6 | zf-H2C2_2 | 736 | 758 | 1.6e-06 | 28.0 | 0.00038 | 0.93 | 9.9 |
| pfu_aug1.0_6531.1_67457.t1 | 7 | 6 | zf-C2H2 | 750 | 771 | 2.7e-10 | 39.9 | 1.4e-06 | 0.0035 | 17.6 |
| pfu_aug1.0_6531.1_67457.t1 | 7 | 6 | zf-C2H2_4 | 751 | 771 | 3.3e-06 | 27.0 | 9.2e-05 | 0.23 | 11.8 |
| pfu_aug1.0_6531.1_67457.t1 | 7 | 7 | zf-H2C2_2 | 763 | 786 | 1.6e-06 | 28.0 | 0.00015 | 0.36 | 11.2 |
| pfu_aug1.0_6531.1_67457.t1 | 7 | 7 | zf-C2H2 | 777 | 802 | 2.7e-10 | 39.9 | 0.25 | 610.0 | 1.1 |
| pfu_aug1.0_6531.1_67457.t1 | 7 | 7 | zf-C2H2_4 | 777 | 802 | 3.3e-06 | 27.0 | 0.028 | 68.0 | 4.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_6531.1_67457.t1 | gi|332021870|gb|EGI62206.1| | PR domain zinc finger protein 4 [Acromyrmex echinatior] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_6531.1_67457.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6531.1_67457.t1 atgagaaaaaaatattgcccacttcacaagcngatagaaagggaacaatcattgtcatatgttgaatcaaacacatacaa tcacaatgacgacgaagatgttaaaccagaaataccgagtgaatcttcgtccggtctcacggcagggatatatagtcatc aaaacgcaggaagattgaatcgttcaaatcaggaaagagctgaagaagtaccactgaagtacagcctccgaaaacctgga cgatctattgtctctgaaatcagtaaagcagaggaggaatcttctaatgaagaagaagaggagaaaattggagaggaaga tgatgaagatgatgatttttcagttcaaaagtctgtaaaggaagcaagagaaaggaggactatcaagagaaaaagtgaca ctgattttgagttacgacgtagtggtcctgcggagattgtaaaagtaaattatccagcgtccggaaacatatttaataaa gagcttagagtacacgtgtatgacatatttgataaaaacaagagaaaaaaaatgacgatggattacaatgatttcacatc agttaaaattaaagaagaaaatattgtgaaagatgaagttaacaattggaatcagcttcaatcagaggaaaaccatcaga acgctgacaaatgtgaagataaagaagatataacactgtcaatgaaagttgaaactgaagaagaaatgaatgaaaatctc agttggtcacatggtttgttagaggcaagtaaacgtgcttcttcttcaggtgaggaagaacatgaagaagtcgaggaaca acactctgacgaacaatttattcccacgctaccaccgaggagacccaatgtatgtgaatatgtgggggaggatacagaga tgagagcaggaaggcaaaatgaaaagaagaagaaaagaagagatgctcatatagaaaaggatgatcagaaaagagatagc ggtgatatggacaagaaggaaatatatgatatggaaatgaagagaagaaatgatatagaaaagaaaaaaagagatattga taagatggaaaagaagaaaatagttgatatggacgagatgaaaatagatgatatgaacaaggataaaatagttgatatgt acaagaagaaaatagatgatatgaacaaggataaaatagatgatatggacaagaagaaaatagatgatatggacaagaaa gtaaagtatgatatggaaatgaatagaagaggtgatattgtcattgaacttgaaggtgctcctaaggttcagtttcatag atgtgttgaattttgtaattctgaagtttgtaaaagtaaaaaaccgttggtaaagcctgctagggtcatagcaaataata cagaatgtacaaacagcatcaaggctttggccagtctgccagatgtgttgagtgtaaaatttgtggacagagatcacggt atgggagtgtttgctatggaggaactgcctacgggatctatgcttggaccagtggaaggtaaacggaggacattccagga catggatatgaaggaggacttgacttatatatggatggtgtacacgagaggcaaggaaaatcctctagatgataaatata tctgtatgaaggatcaaatgacaagtaattggtgcagatatgtgcgagcaacagttgacattgatcagagtaacttaaga tgtatggtggacgaatcaaccaatcaactctacttacagtcaagaaaaactatagcccctggtgaggagctagtttactt gatctcaggatctgtatcaaccaagacatcagatctgaacaaattcacctgtgaacgatgtgacatgaagttccactcca atatcttatatgccaaacatcgtctaatttttcatacttatggaatgcaatacttaaaatcacagtgtaaggtgtgcctc agaatttttgaatctgagtctagactaaaacgtcacgtcaaagtggcacatgatggtaaaggggcgaaaaaatgtgatgt ctgtcagaaagattttttgacaatcaaaatgctcaataaacataaaagattgatgcacgaaatcacaggtgaacattcat gctatctatgtggaaatatctatcaaaatgaagccaaactcaatgctcatgtaaaatcaattcaccgactgcgaacatcg gagtgtgacatctgtgggagagtgttcaaattaagcggtacgatgaagcgacatcgtcgtgtgcattttcagcaagactg gtacatcacatgtgaattctgtggaaaaacgtgtcgagatatatcaaatttgaagattcatttgcttacacacacaagtt ggagactttaccagtgtaagatacatggctgtacggcagcctataatgtgaagtgttctatggagcttcattacatcagg gatcacaatctgacggagaaggaatacccccctattaccactgctttcccatacacactggagggtttaacacagataat cagatttcctgaacaancaaggtcacattaa |
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Protein
| Protein ID | pfu_aug1.0_6531.1_67457.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6531.1_67457.t1 MRKKYCPLHKXIEREQSLSYVESNTYNHNDDEDVKPEIPSESSSGLTAGIYSHQNAGRLNRSNQERAEEVPLKYSLRKPG RSIVSEISKAEEESSNEEEEEKIGEEDDEDDDFSVQKSVKEARERRTIKRKSDTDFELRRSGPAEIVKVNYPASGNIFNK ELRVHVYDIFDKNKRKKMTMDYNDFTSVKIKEENIVKDEVNNWNQLQSEENHQNADKCEDKEDITLSMKVETEEEMNENL SWSHGLLEASKRASSSGEEEHEEVEEQHSDEQFIPTLPPRRPNVCEYVGEDTEMRAGRQNEKKKKRRDAHIEKDDQKRDS GDMDKKEIYDMEMKRRNDIEKKKRDIDKMEKKKIVDMDEMKIDDMNKDKIVDMYKKKIDDMNKDKIDDMDKKKIDDMDKK VKYDMEMNRRGDIVIELEGAPKVQFHRCVEFCNSEVCKSKKPLVKPARVIANNTECTNSIKALASLPDVLSVKFVDRDHG MGVFAMEELPTGSMLGPVEGKRRTFQDMDMKEDLTYIWMVYTRGKENPLDDKYICMKDQMTSNWCRYVRATVDIDQSNLR CMVDESTNQLYLQSRKTIAPGEELVYLISGSVSTKTSDLNKFTCERCDMKFHSNILYAKHRLIFHTYGMQYLKSQCKVCL RIFESESRLKRHVKVAHDGKGAKKCDVCQKDFLTIKMLNKHKRLMHEITGEHSCYLCGNIYQNEAKLNAHVKSIHRLRTS ECDICGRVFKLSGTMKRHRRVHFQQDWYITCEFCGKTCRDISNLKIHLLTHTSWRLYQCKIHGCTAAYNVKCSMELHYIR DHNLTEKEYPPITTAFPYTLEGLTQIIRFPEQXRSH |
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