Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_6531.1_67458
Locus scaffold6531.1 : 16263 ... 19725 : -
To GenomeBrowser scaffold6531.1:16263..19725
Genes list of scaffold scaffold6531.1
Synonym pfu_aug2.0_326.1_20618

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_6531.1_67458.t1 1 1 MRP-63 7 81 9.7e-13 48.3 2.3e-16 1.1e-12 48.1

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
egg-4cell 1
>Adult tissues
mantlePallium 1
pearlSac 2

Transcript
Transcript IDpfu_aug1.0_6531.1_67458.t1
Definition-
>pfu_aug1.0_6531.1_67458.t1
atgcctgcgttagaccggcacagaaaggccaacatggtgaggcacttgctccgggaagaggacaacttacagattctaga
aaatcattatttgtcaaaggaggaagaatatgggatagctaaacagatgattgctgaaggaataaaggaagcaaaatcac
atcctcaacacgtggctaaacgatggcaggaacacaaacttatatctgaacacttagaacatttaaatgtaacgaaagct
tgggagtga

Protein
Protein IDpfu_aug1.0_6531.1_67458.t1
Definition-
>pfu_aug1.0_6531.1_67458.t1
MPALDRHRKANMVRHLLREEDNLQILENHYLSKEEEYGIAKQMIAEGIKEAKSHPQHVAKRWQEHKLISEHLEHLNVTKA
WE

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