Gene
| Gene Model ID | pfu_aug1.0_6534.1_02263 |
|---|---|
| Locus | scaffold6534.1 : 3726 ... 11755 : - |
| To GenomeBrowser | scaffold6534.1:3726..11755 |
| Genes list of scaffold | scaffold6534.1 |
| Synonym | pfu_aug2.0_814.1_14579 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6534.1_02263.t1 | 2 | 1 | 7TM_GPCR_Srx | 39 | 228 | 7.6e-06 | 25.2 | 2.0e-09 | 7.6e-06 | 25.2 |
| pfu_aug1.0_6534.1_02263.t1 | 1 | 1 | 7TM_GPCR_Srsx | 43 | 339 | 2.9e-12 | 46.3 | 1.1e-15 | 4.1e-12 | 45.8 |
| pfu_aug1.0_6534.1_02263.t1 | 1 | 1 | 7tm_1 | 46 | 325 | 0.0 | 247.2 | 0.0 | 0.0 | 246.6 |
| pfu_aug1.0_6534.1_02263.t1 | 2 | 2 | 7TM_GPCR_Srx | 280 | 324 | 7.6e-06 | 25.2 | 0.053 | 200.0 | 0.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_6534.1_02263.t1 | gi|325296741|ref|NP_001191606.1| | octopamine receptor [Aplysia californica] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_6534.1_02263.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6534.1_02263.t1 atgggtacaacaatgattccggataatgtgactaacataacttcttacagacaggaagagcaagacacttgggataccgc catcctcgttatgaaggctgtcgtcatgacaacaataatggcggcagccgtgactggaaatttaatcgttatcattagcg tgatgaaatttcagaaacttcaagacagtaaaacaaatcaatttatcgtctcgttggcttttgctgatttcctggtcgcc ttccttgtgatgcccttcaatgccagtcaggaaatctccggaaagtggatatttggaagagagatgtgtgacatatttaa ttccaacgatgttttattcagcactgcatcgattcttcatctttgctgtataagtgtcgaccgatatattgctatcatac atccccttcaatatgatcgcaagatgtcgacatttcgcgctctccttatgctagcccttacatggattgcgtcaattctt atatcatatatcccaatccaactccagttctatacaaccgaggaacactatactttactggaagagaaccccgaattatg tatattccaggttaataaaatatacgcggttgtgtcatccagtatctcattctggatcccttgtactataatgatatttt tatacatgaggatatactttgcagcccggcgtcaggagaagcacatccgatctaatagtatatgttcacatgaacggaca ggaaacagcgaagctttgctgaatactaccagaaattcacgagaattctccgatagacgcaaaatgaaacgagaacacaa ggcagcaaagacactgggtatcataatgggggcttttgttatgtgctatctcccgtttttctcttggtatgtatctacca ctatgtgtgggagtagttgtccctaccccagggtacttggatcaatccttttctggattggatatttcaactcgtgtctc aatcctgttatttatgcgtattacaatagagaattccggactgcatttaaacgtctcttgcatattcacagtcatacaac gaagagaagactgtctctattgaaaaataacacaacatcaaagccaaatggaactgatcgtcatatacatttggtttatt tacagaaaaatgaagattcacctcaactcctctga |
|
Protein
| Protein ID | pfu_aug1.0_6534.1_02263.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6534.1_02263.t1 MGTTMIPDNVTNITSYRQEEQDTWDTAILVMKAVVMTTIMAAAVTGNLIVIISVMKFQKLQDSKTNQFIVSLAFADFLVA FLVMPFNASQEISGKWIFGREMCDIFNSNDVLFSTASILHLCCISVDRYIAIIHPLQYDRKMSTFRALLMLALTWIASIL ISYIPIQLQFYTTEEHYTLLEENPELCIFQVNKIYAVVSSSISFWIPCTIMIFLYMRIYFAARRQEKHIRSNSICSHERT GNSEALLNTTRNSREFSDRRKMKREHKAAKTLGIIMGAFVMCYLPFFSWYVSTTMCGSSCPYPRVLGSILFWIGYFNSCL NPVIYAYYNREFRTAFKRLLHIHSHTTKRRLSLLKNNTTSKPNGTDRHIHLVYLQKNEDSPQLL |
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