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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_654.1_07618
Locus scaffold654.1 : 91246 ... 110269 : +
To GenomeBrowser scaffold654.1:91246..110269
Genes list of scaffold scaffold654.1
Synonym pfu_aug2.0_1314.1_14953

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_654.1_07618.t1 1 1 Arrestin_N 7 155 1.0e-36 125.9 2.8e-40 1.4e-36 125.5

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_654.1_07618.t1 gi|72040369|ref|XP_796522.1| 0.0

Transcript
Transcript IDpfu_aug1.0_654.1_07618.t1
Definition-
>pfu_aug1.0_654.1_07618.t1
atgggtaaattgaaatgtttcgaaattattctcacggacaacaagtccgtattccatccaggggaaaaggtgtgtgggaa
agtggtggttgaactgaaaggagacatgaaaatgcgttctcttcgagtctttatgagaggtgttgccaaagttcattgga
cggaatcacgcagcacgggaagtagactgggctcctatacagagcattacaatgcagaggtggaatacttcttcaagcga
caagtattatttggtggagaggtgtgtgaaggaagagacacgttaacagaaggttaccatgagtttcgattctcttttga
gctacctatgggtggtatatctacatcgtttgaggggaagcatggcagtgttcgatactggatgaaggcagagatggaca
aaccatggtcatttaatcataaaactaaaaaagcttttactgttatcagtcccatcgatataaataagcaggagtaccag
atggggatgaagcccctggggttcagattttttaaaattatttcaaatgataaggcaaatgttgatgataaggtagccct
ccatatacctggatcatacaatctcactttacatctacctgtggtcataggtaccgtgccatacagaaggggaacttttc
gatttacagagtctcatttcttcagagaaactcaaccacagtttgagagcatgagttgtctccctctgccgccaccatac
agagaaactattacaccccctccaccatttgaagatcctcctacgtatcatgagagtgtgggtggggcagtcagtatagt
agatgaggaggatggagatgacccggacttcaacatgggggacctgacctacacacccatgtatacatatgtgtataatt
atagacccccacctgcttatgctgagagaaggacaaaatacgcggcagaccttttcatttctctcgcgtaa

Protein
Protein IDpfu_aug1.0_654.1_07618.t1
Definition-
>pfu_aug1.0_654.1_07618.t1
MGKLKCFEIILTDNKSVFHPGEKVCGKVVVELKGDMKMRSLRVFMRGVAKVHWTESRSTGSRLGSYTEHYNAEVEYFFKR
QVLFGGEVCEGRDTLTEGYHEFRFSFELPMGGISTSFEGKHGSVRYWMKAEMDKPWSFNHKTKKAFTVISPIDINKQEYQ
MGMKPLGFRFFKIISNDKANVDDKVALHIPGSYNLTLHLPVVIGTVPYRRGTFRFTESHFFRETQPQFESMSCLPLPPPY
RETITPPPPFEDPPTYHESVGGAVSIVDEEDGDDPDFNMGDLTYTPMYTYVYNYRPPPAYAERRTKYAADLFISLA

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