Gene
| Gene Model ID | pfu_aug1.0_6558.1_09383 |
|---|---|
| Locus | scaffold6558.1 : 906 ... 8721 : + |
| To GenomeBrowser | scaffold6558.1:906..8721 |
| Genes list of scaffold | scaffold6558.1 |
| Synonym | pfu_aug2.0_1537.1_24991 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6558.1_09383.t1 | 1 | 1 | Lectin_C | 17 | 124 | 1.2e-18 | 67.6 | 1.3e-22 | 2.0e-18 | 66.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_6558.1_09383.t1 | gi|225906401|gb|ACO36045.1| | C-type lectin 1 [Pinctada fucata] | 2.0e-38 |
Transcript
| Transcript ID | pfu_aug1.0_6558.1_09383.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6558.1_09383.t1 atgtacaacacatacaccagacattgcttcactataaacatagcaaagaccgccaactggtatgcagccaaatcttcttg tgaaagtcttggtggatacctagcccgaccccgggaatttagtgacaacatgtttattggattcagggcccgaggagcac ttcattacaaatataaacatatctggattggactttctgatacagagaaagagggtgactacagatggacaaatggggat tctctcaattacacaaactggggatttagggagccgactggaactccatggcaaaactgtgtagcttacgatagagacac tgataaatgggatgacaaagactgttacttaaagtatggttgggtatgccagtatgatcataatgctaagcctgtaacaa ctccaatccccacatcaaagtcctcaacgcatgcgtcaactacgccgcgcagtaaacatacatttaaaccaaccactgtt aagccagcgtcgacaactcctgttccaacaactgaaacgccctctaccacgaaaccaagtacggtaactccttcgcctac ctccgcttcaactactccttccagtactcctagagtctctactacacatactccgtccaccacgcctttgtcctcaccga caactcataagatacatgtaccaacgaccaggaaacctatcaccgggacccacagatttcctggatatgaaataatagga taa |
|
Protein
| Protein ID | pfu_aug1.0_6558.1_09383.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6558.1_09383.t1 MYNTYTRHCFTINIAKTANWYAAKSSCESLGGYLARPREFSDNMFIGFRARGALHYKYKHIWIGLSDTEKEGDYRWTNGD SLNYTNWGFREPTGTPWQNCVAYDRDTDKWDDKDCYLKYGWVCQYDHNAKPVTTPIPTSKSSTHASTTPRSKHTFKPTTV KPASTTPVPTTETPSTTKPSTVTPSPTSASTTPSSTPRVSTTHTPSTTPLSSPTTHKIHVPTTRKPITGTHRFPGYEIIG |
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