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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_6559.1_31237
Locus scaffold6559.1 : 1 ... 10969 : +
To GenomeBrowser scaffold6559.1:1..10969
Genes list of scaffold scaffold6559.1
Synonym pfu_aug2.0_46.1_20109

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_6559.1_31237.t1 2 1 Hist_deacetyl 1 66 0.0 249.0 3.9e-22 5.7e-18 65.2
pfu_aug1.0_6559.1_31237.t1 2 2 Hist_deacetyl 101 244 0.0 249.0 0.0 0.0 185.9

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_6559.1_31237.t1 gi|193787785|dbj|BAG52988.1| unnamed protein product [Homo sapiens] 0.0

Transcript
Transcript IDpfu_aug1.0_6559.1_31237.t1
Definition-
>pfu_aug1.0_6559.1_31237.t1
ggtgttaattttagactgggatgttcatcatggtcaaggcatccagtacagcttttacaatgatccaagagttctgtata
tttctatccataagtacctgtacggagaggaatggccgtacctgagggaatcagactttgactatataggtgaaggacag
ggacgtggatttaacattaatattccattaaacgaaggaggatactgtattaagactctggcagagggtgtggccctgtc
cctaggagctttactaggagatccctgccctagaattggtcacatcggtgctcctcacaaaagaccaccaggacatcatg
ctgaggccaacttaatgatgggattttgtgtatttaacaatgttggtattgctgtaaagtacgcacagaaaacttatggc
gtcaaaagaattctgatcgtggattgggatattcaccatgggaatgcgctacagtcacagttctatgatgatataagtgt
gttatatgtatccttacaccggtttgaccaaggttcgttttatccgtatggtggggaaggctaccacaaacgtgttggag
gcaaaaaggctcagggattcaatgttaatattgcctggaatgatggttcgaaaggagacggtgattacatctcggctttt
catcatttggtactcccactggcttatgagtttgatccagagttagtgtttgtagctgcagggttcgatgctgtacaagg
agatgaactgttgacctacccacagaacctcaaatcaacgatatga

Protein
Protein IDpfu_aug1.0_6559.1_31237.t1
Definition-
>pfu_aug1.0_6559.1_31237.t1
VLILDWDVHHGQGIQYSFYNDPRVLYISIHKYLYGEEWPYLRESDFDYIGEGQGRGFNINIPLNEGGYCIKTLAEGVALS
LGALLGDPCPRIGHIGAPHKRPPGHHAEANLMMGFCVFNNVGIAVKYAQKTYGVKRILIVDWDIHHGNALQSQFYDDISV
LYVSLHRFDQGSFYPYGGEGYHKRVGGKKAQGFNVNIAWNDGSKGDGDYISAFHHLVLPLAYEFDPELVFVAAGFDAVQG
DELLTYPQNLKSTI

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