Gene
| Gene Model ID | pfu_aug1.0_6562.1_16947 |
|---|---|
| Locus | scaffold6562.1 : 1 ... 10995 : - |
| To GenomeBrowser | scaffold6562.1:1..10995 |
| Genes list of scaffold | scaffold6562.1 |
| Synonym | pfu_aug2.0_1709.1_31858 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6562.1_16947.t1 | 1 | 1 | NACHT | 224 | 395 | 3.4e-12 | 46.3 | 9.8e-15 | 4.8e-11 | 42.5 |
Transcript
| Transcript ID | pfu_aug1.0_6562.1_16947.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6562.1_16947.t1 atggacgtctccctctgttgtttggtgctgcataatatttgttccggtgtcagcttgtcagacgtcgatacaatcagaga tgtccgtaaccaattgatacatgccagcaacgctagtctagatgccactctatatttagccacatggagtaaagttgaag cagctatgcttaatctggcacagggagtgtctacttcattcagaagtgatatcattagtgctgtccaaaccctgaaaaat cgattgatagatacaagtgaactttccgcactaaaggatctggtcatggatgaaaaaagaatttctgaaatagagaagat acaagatgctacgaaagtggaattggcgcagcacaaagaaagattctgtcatgttgagcatgaaatcgaagagaagacag aagaacttaaacagaccttacttgagtcatatgaaaaagcaacacaaaagatccaggtttctcctcttcagaagaaagct aaaaagcttccacttgacatgatatttgctcctgttgtgataaggcaagatttagaggacaaaaccacagagtctgatct agaggacaaagccacaatgtcaaatcaggatgattccaaacccaacgtgaagactcagcaagtaagaaatccaaaagaca tgttttacaagaatgataaacctgtccgacatatttttatgcagggggaagcagcacatgggaaaacagtattttgcaaa caactgttacaaaattggtgtacatctaagcaggttggagcaattaatgaggacctcacagactgggaaaaaagtcttga tgaatatgactttgttttctttgttatgtttcgtctggctaacaaaaatacaatttcaatcgaccagatgattcttgatg aactttcacagcatagcccagagtgtgttgaagcgattcgtcatgtcctgtccaatagaaagtatcgttgtttgattata atggatggtctagacgagtggaggatatctcaaaagcagagaaaaaacctgagacataaaagatttcctaatactggaaa tttatcaaagagctgttcccttttcatcaccttcagaccatgggtgtatgatgtcatagcagatctgatggaagattgtg acagagttgttgatatttgtggattagatgaaaaggggattacccttctgattgagaagatgcttatcaacttctacaac atggatacagcaagtgaacaatacaatgagacaagggagaaaatgatcaagaagtcaaaagatgaaaatcttaagtctat catggagatacctttgttgttaacagcgtctgtgatgttgtggtttgagaaagaacagactgatttgggaagcatgacaa atttttacatatccctggtacagcttttgataaagagagcgatggatacagaatcattggatgaagatctcatagagagg cttgtgaaaaagccaacttctgggatacaaataccaagcatcttacaaaaggctagaaataaaacagtgcggagatttat tgatgtgttaaataccctggggaaattggcctatgatgaccttctatctgatgaaaccaatttagtgtttgggaaggaag aattggaggacaagatagatgaagataatatggagtttgccttgagagtaggacttctgagtcaatgtgaggcacctgga tgttttgacgaggaaaatgttagtgtcaactttttccacaagactgttcaggagtttcttgcagccttacatgttatatg caatgttgaagagattttaaaggagttttgctgtcaccttcagagtatagatagactgtttgatttatctaatgtagtaa tgttcctttctgggctgtcaccatctgttggtgatgatctgtcaaagcatgtagcatgtctttcagataaggactctgaa atatgcagataccgggaaacgttttcaggtccttcgttcaaagttctttggctttacaagttccaaatccgttgttatca ggaaatgataaatgatgaaacagtactggctgatggacatgaggtcattggatttcatgggaaagatatcattttagatc tggtacccgatgcaagtacaattcaatgcacttctgaaatactgggacatcatccccatgtttcaactttgaatctatat caatgtataaatgggctttcagagtttttggcaagctgtgaaacattacattctattttccttggtggtcctctgaagac aatttccaattttggaaagtgccttccccttaaacatttgtgtttgaatcaagtcatgctcacagacgatgcctcttatg ggatagttcattctgtaaagtcaagtctacatttgaggacgctgaatcttctcaatgttacactaaattcaaaatcagac tgtgcatcacttacgtctcaaagctcttgggtccatgatttactccatgtacttccaaattgtctaaagttgacgaaatt acatattgattgcaaaacactacaaa |
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Protein
| Protein ID | pfu_aug1.0_6562.1_16947.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6562.1_16947.t1 MDVSLCCLVLHNICSGVSLSDVDTIRDVRNQLIHASNASLDATLYLATWSKVEAAMLNLAQGVSTSFRSDIISAVQTLKN RLIDTSELSALKDLVMDEKRISEIEKIQDATKVELAQHKERFCHVEHEIEEKTEELKQTLLESYEKATQKIQVSPLQKKA KKLPLDMIFAPVVIRQDLEDKTTESDLEDKATMSNQDDSKPNVKTQQVRNPKDMFYKNDKPVRHIFMQGEAAHGKTVFCK QLLQNWCTSKQVGAINEDLTDWEKSLDEYDFVFFVMFRLANKNTISIDQMILDELSQHSPECVEAIRHVLSNRKYRCLII MDGLDEWRISQKQRKNLRHKRFPNTGNLSKSCSLFITFRPWVYDVIADLMEDCDRVVDICGLDEKGITLLIEKMLINFYN MDTASEQYNETREKMIKKSKDENLKSIMEIPLLLTASVMLWFEKEQTDLGSMTNFYISLVQLLIKRAMDTESLDEDLIER LVKKPTSGIQIPSILQKARNKTVRRFIDVLNTLGKLAYDDLLSDETNLVFGKEELEDKIDEDNMEFALRVGLLSQCEAPG CFDEENVSVNFFHKTVQEFLAALHVICNVEEILKEFCCHLQSIDRLFDLSNVVMFLSGLSPSVGDDLSKHVACLSDKDSE ICRYRETFSGPSFKVLWLYKFQIRCYQEMINDETVLADGHEVIGFHGKDIILDLVPDASTIQCTSEILGHHPHVSTLNLY QCINGLSEFLASCETLHSIFLGGPLKTISNFGKCLPLKHLCLNQVMLTDDASYGIVHSVKSSLHLRTLNLLNVTLNSKSD CASLTSQSSWVHDLLHVLPNCLKLTKLHIDCKTLQ |
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