Gene
| Gene Model ID | pfu_aug1.0_6565.1_38366 |
|---|---|
| Locus | scaffold6565.1 : 34746 ... 39754 : + |
| To GenomeBrowser | scaffold6565.1:34746..39754 |
| Genes list of scaffold | scaffold6565.1 |
| Synonym | NA |
Manual annotation
| Study field | Environmental Response |
|---|---|
| Gene name | neuropeptide Y receptor Y6 |
| Description | BLASTP top hit to ABI94073.1 [Latimeria chalumnae] |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6565.1_38366.t1 | 1 | 1 | 7tm_1 | 52 | 310 | 1.0e-14 | 54.3 | 1.8e-18 | 1.4e-14 | 53.9 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-Dshape | 1 |
| >Adult tissues | |
| Dshape | 1 |
Transcript
| Transcript ID | pfu_aug1.0_6565.1_38366.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6565.1_38366.t1 atggacaacaagatttgtcttgactggctgatacaagcgcacaactttaattcgaacgtcacccttagtgaacttaacca tgccatacttgacgacttcttctacctatttttggccaccatttttacactggctgttgggacggtgggaaatctaacat gcctcatggtgtactggaagtctataggaaagtcccgattcagaacgtatgtgctgtacatatccagcatcgacactatc tcgtgtgttgtattcacgccaactgtgataatatatctcatctcgcctcttaactatcctagcgaggctgcgtgtatatt cagtcattatgtcggagatttcaccaagctagctggaagcatggcacttttactgatagcactcgagagatgtcgacatg tgtttaaaccccacatctcaacctccagagaaggagtcaaggtcggtttcttttttgggatattttttgcatttcttgct gcatctccgaggctaaaaataatgggagtgacggaacttacaataaaggaactgaacataacagctcgaccctgtttcaa ggagaaggaattcagatataccgaatttggacgaggctacgtagtattcatcaacatggcaacttgtatattgagctctc tagcccttcttgcttccagtataagtatggtcagaactcgttccgtgccccaatttaaagttcgggaagaaatgcttccg acaaggctgcagtattcgaaaaatctgaccactatgatgtttatagccactctgaagtttactttggtcaactttccctt gagcgtctttttgatgattcgatacttggaagaggaccatgaatgcatcttgaattttttccgcggacttctgatgcatt tatttggcttccttttggttctacatctggtgcttaatccgtttatctatggatatttcgacagtagattccgtcaggaa gttggttcgctgttcttcacttttacgcgaacgcaaattgtagacactgacaatgatgaagaaaagaaggacagcttggt agcttcaattgaattccctaatgacatagaagaaaagcaagtgaaggaaggcttcaagtctattgccgaaaataaaaccg attccgaactagatgaaaaacaaggacagaaataccgcaagaagtctttaagtaaaagtttgcatggctacatcagaaaa cctaaaagaccgatgcatagaccctgcggagatctgaataaaagctttacagtcagaatatctactgacttacagtaa |
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Protein
| Protein ID | pfu_aug1.0_6565.1_38366.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6565.1_38366.t1 MDNKICLDWLIQAHNFNSNVTLSELNHAILDDFFYLFLATIFTLAVGTVGNLTCLMVYWKSIGKSRFRTYVLYISSIDTI SCVVFTPTVIIYLISPLNYPSEAACIFSHYVGDFTKLAGSMALLLIALERCRHVFKPHISTSREGVKVGFFFGIFFAFLA ASPRLKIMGVTELTIKELNITARPCFKEKEFRYTEFGRGYVVFINMATCILSSLALLASSISMVRTRSVPQFKVREEMLP TRLQYSKNLTTMMFIATLKFTLVNFPLSVFLMIRYLEEDHECILNFFRGLLMHLFGFLLVLHLVLNPFIYGYFDSRFRQE VGSLFFTFTRTQIVDTDNDEEKKDSLVASIEFPNDIEEKQVKEGFKSIAENKTDSELDEKQGQKYRKKSLSKSLHGYIRK PKRPMHRPCGDLNKSFTVRISTDLQ |
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