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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_65901.1_34741
Locus scaffold65901.1 : 1 ... 3735 : -
To GenomeBrowser scaffold65901.1:1..3735
Genes list of scaffold scaffold65901.1
Synonym pfu_aug2.0_942.1_08026

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_65901.1_34741.t1 1 1 Sulfatase 4 177 2.2e-25 89.5 3.6e-29 2.6e-25 89.2

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_65901.1_34741.t1 gi|242005522|ref|XP_002423613.1| sulfatase-1, sulf-1, putative [Pediculus humanus corporis] 0.0

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
8-16cell 1
>Adult tissues

Transcript
Transcript IDpfu_aug1.0_65901.1_34741.t1
Definition-
>pfu_aug1.0_65901.1_34741.t1
atgcatgtgatgccaaagacattacgaatcatgcgtgaccagggtgtacatttcaacaactcgtttgtctccacccccat
gtgctgcccctcccgtagtaccctcctgacggggatgtacacccataaccacaacacctacaccaataatgataactgct
cctcgttatactggcagaggaaacacgagacaaggagcttcgctacctacctgaatgatgcagggtacagaacaggttat
tttggaaagtatttaaacgagtacaatggcacatacattcccccaggatggagggagtgggtggggcttatacgtaacac
cagattctacaactatacggtgaacttcaacggtagaaaaatgaagcatggagataattactatacagattatttcactg
accttatagctaatgatagtgtcacattcctaaagcaaagtaaacagtatttcccacaaaggcctgtgatgatgatgctg
agtgtccccgccccccacggacctgaggactccgccccacagtatcaacatttattctttaacaatacattacatag

Protein
Protein IDpfu_aug1.0_65901.1_34741.t1
Definition-
>pfu_aug1.0_65901.1_34741.t1
MHVMPKTLRIMRDQGVHFNNSFVSTPMCCPSRSTLLTGMYTHNHNTYTNNDNCSSLYWQRKHETRSFATYLNDAGYRTGY
FGKYLNEYNGTYIPPGWREWVGLIRNTRFYNYTVNFNGRKMKHGDNYYTDYFTDLIANDSVTFLKQSKQYFPQRPVMMML
SVPAPHGPEDSAPQYQHLFFNNTLH

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