Gene
| Gene Model ID | pfu_aug1.0_6602.1_45483 |
|---|---|
| Locus | scaffold6602.1 : 26845 ... 33295 : - |
| To GenomeBrowser | scaffold6602.1:26845..33295 |
| Genes list of scaffold | scaffold6602.1 |
| Synonym | pfu_aug2.0_6134.1_16179 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6602.1_45483.t1 | 2 | 1 | rve | 6 | 18 | 1.9e-07 | 31.2 | 0.53 | 7800.0 | -3.1 |
| pfu_aug1.0_6602.1_45483.t1 | 2 | 2 | rve | 46 | 152 | 1.9e-07 | 31.2 | 3.7e-11 | 5.6e-07 | 29.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_6602.1_45483.t1 | gi|291227759|ref|XP_002733850.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_6602.1_45483.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6602.1_45483.t1 atgctaatgcagatgctcaaacaaaaggggatacaagtgcaacgatggagattcagagagagtatgtggcgggttgatga aggtggtattaaggaacgcaaaaaaggttgtctgaaacgaagagtttatgacgttaaaggaccaaaccacctatggcatg tggatactaatcacaaattaattcggtggcatcttgttattgcaggtggtatagacggatttagtcggatgataacattt ttgttctgtcttgacaataataagtccgagacacttctttcctgtttccgtgatggtgtcgaacattacgggcttccact tagagttcgatctgataaaggactagaaaacattcaaatagctgaatatatgattcagcacagaggagttggtagaggaa gtatgctgacggggaaaagtgtgcacaatcagcggatcgagcggttgtggagggatgtatatacaggcgttctctgtttc tattataatttgtttcatcacatggaggatgaagggctcttggatccgttgaacgaccttcacatagcagcattacacta cacgtacatttcaaagataaacgaaaaactacaaatatggagggacgcatgggcaagccatagaatacgaacagcgaaat cgtcgccacaattaatgtgggtatctggacaattccagaatccggtaggattagattttgttgacgaagaatggtatgga acagagggattggtagaagaaactggggatgacaccttcacaagcaggccaataattgactctgtgtcagctacagttat gactgccgaatgtaaacggcagcttgaccgtgaagtaaatacgacatggatatcatcaagttatgggatggatatttact caaaagttcttcgaataatagagcgtcatctgcatgtgtcttcctaa |
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Protein
| Protein ID | pfu_aug1.0_6602.1_45483.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6602.1_45483.t1 MLMQMLKQKGIQVQRWRFRESMWRVDEGGIKERKKGCLKRRVYDVKGPNHLWHVDTNHKLIRWHLVIAGGIDGFSRMITF LFCLDNNKSETLLSCFRDGVEHYGLPLRVRSDKGLENIQIAEYMIQHRGVGRGSMLTGKSVHNQRIERLWRDVYTGVLCF YYNLFHHMEDEGLLDPLNDLHIAALHYTYISKINEKLQIWRDAWASHRIRTAKSSPQLMWVSGQFQNPVGLDFVDEEWYG TEGLVEETGDDTFTSRPIIDSVSATVMTAECKRQLDREVNTTWISSSYGMDIYSKVLRIIERHLHVSS |
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