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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_6607.1_60063
Locus scaffold6607.1 : 6731 ... 16815 : -
To GenomeBrowser scaffold6607.1:6731..16815
Genes list of scaffold scaffold6607.1
Synonym NA

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_6607.1_60063.t1 1 1 CDP-OH_P_transf 131 210 1.0e-16 61.0 9.8e-21 1.5e-16 60.5

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_6607.1_60063.t1 gi|291242837|ref|XP_002741310.1| PREDICTED: cardiolipin synthase-like [Saccoglossus kowalevskii] 1.0e-29

Transcript
Transcript IDpfu_aug1.0_6607.1_60063.t1
Definition-
>pfu_aug1.0_6607.1_60063.t1
atgatcgaaatgcaaagagtaaaaggtctttttcatcttcaaagagtattcctttttaaagtaaagtcaccaaatttgac
tgacaattgctttgttaagttttacagacctgaaagccacccttctcacccccctaaatacttgcctgcttcatgtttcc
acaagccttgtcgagctcatgttggaattcaacaggcatggggatgctcacagaaaaggaaagcaaatgcaggctttgca
ataaatggcacaatagttgatgcaaaacggactttgtacatccaggctgtactgcatgcaaaggaaaaagaaaatgaaaa
agcaaaggatgcatctgaagaaatatttgaagatcaagctcatcaaacagcacccaagaaagaaaatattctaactgtgc
ctaacatactcacaatgtccaggatagtggccacaccttggcttggttatttggttgtgcatgatcaattcagcttagct
ctgggagtgtttgtagttgctggatttacagatatgcttgatggttacatagctaggaacttcaagaaccagcaaactgt
ttgtggctcattcttggacccactagctgataaattccttgttagtgttttaactatttccctgacagtggcagggttaa
taccagatattgaaataatttttgatatgttattacatcttagtgttatacagatcaagttccagtttggtttcgattga

Protein
Protein IDpfu_aug1.0_6607.1_60063.t1
Definition-
>pfu_aug1.0_6607.1_60063.t1
MIEMQRVKGLFHLQRVFLFKVKSPNLTDNCFVKFYRPESHPSHPPKYLPASCFHKPCRAHVGIQQAWGCSQKRKANAGFA
INGTIVDAKRTLYIQAVLHAKEKENEKAKDASEEIFEDQAHQTAPKKENILTVPNILTMSRIVATPWLGYLVVHDQFSLA
LGVFVVAGFTDMLDGYIARNFKNQQTVCGSFLDPLADKFLVSVLTISLTVAGLIPDIEIIFDMLLHLSVIQIKFQFGFD

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