Gene
| Gene Model ID | pfu_aug1.0_6607.1_60064 |
|---|---|
| Locus | scaffold6607.1 : 19566 ... 29599 : + |
| To GenomeBrowser | scaffold6607.1:19566..29599 |
| Genes list of scaffold | scaffold6607.1 |
| Synonym | pfu_aug2.0_3222.1_09080 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6607.1_60064.t1 | 3 | 1 | DUF2152 | 99 | 208 | 2.1e-10 | 39.4 | 2.2e-09 | 1.7e-05 | 23.3 |
| pfu_aug1.0_6607.1_60064.t1 | 3 | 2 | DUF2152 | 219 | 259 | 2.1e-10 | 39.4 | 0.011 | 83.0 | 1.1 |
| pfu_aug1.0_6607.1_60064.t1 | 1 | 1 | Glyco_hydro_65m | 251 | 594 | 0.0 | 242.8 | 0.0 | 0.0 | 239.6 |
| pfu_aug1.0_6607.1_60064.t1 | 3 | 3 | DUF2152 | 557 | 617 | 2.1e-10 | 39.4 | 9.3e-06 | 0.069 | 11.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_6607.1_60064.t1 | gi|291238074|ref|XP_002738960.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| >Adult tissues | |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_6607.1_60064.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6607.1_60064.t1 atgctactctacatgtggaatataaattttacaaacgatgtggattgcttttcttctgatacccgcttgcgaccctcttt gggtaatggacacgtagccacggttgtaaaaaatgatgcaatatttatgaatggtttatacaatggatataacgtaacga gtcatagagcacgaataccctcgccactgatatctgacctcaatgtatcgtgttttctgctactgaataatccttgctcc tcggttcaaattgcatacgcgttagatgttgggggaggaatcttcattcagactactaccggaaatggattcgtcatcaa actgacgtcatatgcgcatagaactattcctcagcttttggttcaggaaatggacatcatcaatacgctaaaaagaccgc tgcaaattatgacaaacgtaaacagtggaaaatcaagtgaagatattgattttacttcacaatacgtcgcaaattataga gttgagtcgggtaggacccgtcagccggagtacaacataaccggactacaaaatgtaacggtcatatctaccaacgtacc aaagactatagtggcaactccgtacgtcagagaaacacatgtgttcctcgtcagtgtggacaatgattacgtcacagcta aacaagcttatgacgaagaggagcactcccaggcgtggtacgacgtctggaaacggggaaggatatcctttgagggaaac gatacactgtcacaaatcacgttcgccgctatgtactacatactcagcgcgttgcctctcaaagaaactcctgattttgt tggtctgtcacccggagatcttgcacatggagattttaagaaggactaccaaggccatgtattctgggaccaggaaacct ggatgtatcccccggtgcagatgctacacgcggatattgggaaagccatcatacaatctagactccgtgtcctggacaca gcaaagctttatgcgaagtccaggggatatcaaggagccatgttcccgtgggagagtgctcttagtggtctaaacgtatg tccctgggatccagccacgttatacgagcagcacgtgaccggtgacgtagcactcgctttacgtcagtacctcactatga cgaatgatactagtattttaaccaaaggaagggggttagaggccatcacggaaatagctaacttttgggcttcaagggta gagaaacaacctggcagcgatcagtatggagtttttggggttatgccgcctgacgaatatcacgaaaaagtgaacaactc tgcatacaccaatgttatcgccaaaattagccttctgcttccgaagtttgcctatggtctgattggccaactctctgatg tcagacatgaagacatcgggaacaatatgtacattccttttgacaacaaaataggatatcatcccgagtttgatggatac ataaataatataactgtcaaacaagcagacgttgtcttactgggataccctttgatggagccaatggatcaacaaatcag acgaaacgatctggaaatatataaaaaggtgacccccggtggaccagccatgacctgggggatgttctccattggatacc tagagctgaatgatacagtcgcggcagccgatatgttcctcagacaactgctcaacgtcgtccctcctttcaatatctgg actgaaaatattaagcaagagggagctgttaactttatcacaggaatgggaggttacctgcaatcactcatatttgggta cggtggtttccgaatgtatccgaattatttagaattttccggaacacctccgcccggtgtcacttccttcaatataactg gaatagactatctcggtggttctctggactttacgttttacaataatgtgatgacggtgacacaaacagaaatggcagct agagaattgaaaattaaattgtacaaaacaggtttaacgcatgcgttacacgtaggccaacaaatgctgtatggcaatca aaaggcggctattatgccagtgtga |
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Protein
| Protein ID | pfu_aug1.0_6607.1_60064.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6607.1_60064.t1 MLLYMWNINFTNDVDCFSSDTRLRPSLGNGHVATVVKNDAIFMNGLYNGYNVTSHRARIPSPLISDLNVSCFLLLNNPCS SVQIAYALDVGGGIFIQTTTGNGFVIKLTSYAHRTIPQLLVQEMDIINTLKRPLQIMTNVNSGKSSEDIDFTSQYVANYR VESGRTRQPEYNITGLQNVTVISTNVPKTIVATPYVRETHVFLVSVDNDYVTAKQAYDEEEHSQAWYDVWKRGRISFEGN DTLSQITFAAMYYILSALPLKETPDFVGLSPGDLAHGDFKKDYQGHVFWDQETWMYPPVQMLHADIGKAIIQSRLRVLDT AKLYAKSRGYQGAMFPWESALSGLNVCPWDPATLYEQHVTGDVALALRQYLTMTNDTSILTKGRGLEAITEIANFWASRV EKQPGSDQYGVFGVMPPDEYHEKVNNSAYTNVIAKISLLLPKFAYGLIGQLSDVRHEDIGNNMYIPFDNKIGYHPEFDGY INNITVKQADVVLLGYPLMEPMDQQIRRNDLEIYKKVTPGGPAMTWGMFSIGYLELNDTVAAADMFLRQLLNVVPPFNIW TENIKQEGAVNFITGMGGYLQSLIFGYGGFRMYPNYLEFSGTPPPGVTSFNITGIDYLGGSLDFTFYNNVMTVTQTEMAA RELKIKLYKTGLTHALHVGQQMLYGNQKAAIMPV |
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