Gene
| Gene Model ID | pfu_aug1.0_6616.1_16957 |
|---|---|
| Locus | scaffold6616.1 : 14226 ... 21482 : + |
| To GenomeBrowser | scaffold6616.1:14226..21482 |
| Genes list of scaffold | scaffold6616.1 |
| Synonym | NA |
Manual annotation
| Study field | Metabolism |
|---|---|
| Gene name | Pfu-transmembrane agrin like |
| Description | NCBI blastx best hit to ACD93412.1. |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6616.1_16957.t1 | 1 | 1 | Kazal_1 | 122 | 160 | 2.2e-06 | 27.5 | 5.2e-10 | 2.5e-06 | 27.3 |
| pfu_aug1.0_6616.1_16957.t1 | 1 | 1 | Kazal_2 | 127 | 157 | 9.3e-08 | 31.8 | 5.2e-11 | 2.6e-07 | 30.4 |
Transcript
| Transcript ID | pfu_aug1.0_6616.1_16957.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6616.1_16957.t1 atgtatgttataacccggagtccgacacaggtggtcgggaccctgtcttctctaaagaggtttggacatggtcttcacaa aattaaaatacacgagggaggagtatttctagaaaacaagactgaaaaagacaatgagaaacaagtatcaacatatcagg agtcagacgaggaagacgatgaagaagaagaaaacgaagactccttggatgaatatcaaattgaagatatacaaagtaaa caatccctcattttcaaaactttctatgatcaaaacccatgtgacgacgttgaatgccttttcggagcatcatgtgtaac agaaagggatgacagggcagcatgtgtttgtcctgttggggcatgcgtaaatcatgcaggaaattccgtttgtggcagtg atggaatgatttacgaaaacccttgtgaattaaaaatggcatcttgtgaaaaacaattgaatattacagttgccaaggct aacaggtagaggggatgtctctactcgttatatgatgcggcagaggatcgttttgttcacggtaactggacctataagat gatcttggacaaggctgacaag |
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Protein
| Protein ID | pfu_aug1.0_6616.1_16957.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6616.1_16957.t1 MYVITRSPTQVVGTLSSLKRFGHGLHKIKIHEGGVFLENKTEKDNEKQVSTYQESDEEDDEEEENEDSLDEYQIEDIQSK QSLIFKTFYDQNPCDDVECLFGASCVTERDDRAACVCPVGACVNHAGNSVCGSDGMIYENPCELKMASCEKQLNITVAKA NRXRGCLYSLYDAAEDRFVHGNWTYKMILDKADK |
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