Gene
| Gene Model ID | pfu_aug1.0_6628.1_31251 |
|---|---|
| Locus | scaffold6628.1 : 14076 ... 41345 : - |
| To GenomeBrowser | scaffold6628.1:14076..41345 |
| Genes list of scaffold | scaffold6628.1 |
| Synonym | pfu_aug2.0_17340.1_03232 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6628.1_31251.t1 | 5 | 1 | PLAT | 3 | 57 | 1.9e-29 | 102.2 | 0.0019 | 28.0 | 5.1 |
| pfu_aug1.0_6628.1_31251.t1 | 5 | 2 | PLAT | 170 | 276 | 1.9e-29 | 102.2 | 1.4e-17 | 2.1e-13 | 50.6 |
| pfu_aug1.0_6628.1_31251.t1 | 5 | 3 | PLAT | 300 | 406 | 1.9e-29 | 102.2 | 4.0e-10 | 5.9e-06 | 26.6 |
| pfu_aug1.0_6628.1_31251.t1 | 5 | 4 | PLAT | 511 | 551 | 1.9e-29 | 102.2 | 3.9e-05 | 0.58 | 10.5 |
| pfu_aug1.0_6628.1_31251.t1 | 5 | 5 | PLAT | 604 | 642 | 1.9e-29 | 102.2 | 0.00026 | 3.8 | 7.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_6628.1_31251.t1 | gi|115631520|ref|XP_001200222.1| | 7.0e-40 |
Transcript
| Transcript ID | pfu_aug1.0_6628.1_31251.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6628.1_31251.t1 atgacaacagggaaaggagattccatggcaaccagtaacatggtgttcctctatgcgtatggaagcaaggattctattgg tccacttaaattagggagtggcaaggatggtaacttcctctctggcaaagaggacaaggtcaagctgaatttacaagact gtgtaaccggggatgcgttttccattgatgtggatcgttggttgagccgttcccaagacgatggggacatctggagggaa tttgccgtacctcaaggagggaagcctgccttaccagatcctttcaaagtattagtcattattcataagaaagtcaaact caaatgctgtaagatttctaaacttaaatgtatagtaacaaattgtctttaccatggttatacctttgattttcatgcta tgagtgttgttcattgtgattatagatggcttgatgagaaaaaaggagatcataaatgtgaagtagatctgtacccaggc gaagaaccctctgaatcaagaggtgaatacagtatagtgttgaagacagcagaggattcctccccgtcctgtggtggtag ggtcaatatgtgtgtatatggctctaaggggaagagtgaggacatcacactgtacgctcctgatcccacggccgatctgt ttgaacctggcaatattgacagctttgttgtaaactttggtaacataggagagataatgaagatccgattagagcatgac aacacaaactcttctccatcctggcacgttgactgggtgaagcttacagatatagatacgaacgaggagttggtgtttta tataaatgagtggtttgccattgacgagggagatggacagattacgagggaattctctgtggataaaccgggagatatgc ctttaccattaacacaatatgtggttgtggtaacaaccagtaaagattctgatccaatggccagtcatggacttgtaagc ctcaatttgattggtcagtttggggatacaggaatgaggccgctcaatcaaagtatactcagtgactcatcaccatggaa accgggctcagaggatgttttcattatagaagctgtttctgttggaaaagtagaaacgatacaattgcagtatgagggtc aagatactgtgtggtgtgtagagaaggtacatgtgtatgagagattggcagcaatatcccagactgtgttcaactgctac aaggcatttggtacaaaagatcaaggtcctgttgtaatggaagaattcaaatactcagatacaggattccggcgaatcgt cgctgttgaagctaaaaagcagcatctagatccggtattctttgtgttgttcaacatttcttatgcgaaaaaaacatttt ctaatcttgattatattgccgaagtaccggtcaaagtgaaagataatgataccaaggaagaattacagtttatttataat gaccttttgacctgtacggaggataatcctgatggtagcgttgaacttccggccgttagaccagacatagctcctctaca agaggatgaatacaccttttacattgctacgggtaaccgccctgaggcagcgacagagtcagatgtgttctgtgagctga ttggtgactggggaagcagtgggcggagattactcactcagtctaaaaataaagtacctttcaagcgtggccaggtgatc ctaactgatgatgatacaggagagatgctaacgtatgacttctcacaatggttaggagaggtcgctggtgatatacgtaa agaactccccaccatcaaaatgggtcaaggatacaaacaagtaattccatattacgtggaggtccataccagtgatgagg agatggactctgatacgtattcaaacatctttatcacattgtatggactgatcgcagacactggaaggcgccatctagtg gagagcaggagtaacaaaatcaaattccagacaggaaagatcacatctagcgtcttaaggacaattaaaggaaagtcagc taacattgctaatgaagctcctgagcaagtttcatcctaccggtag |
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Protein
| Protein ID | pfu_aug1.0_6628.1_31251.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6628.1_31251.t1 MTTGKGDSMATSNMVFLYAYGSKDSIGPLKLGSGKDGNFLSGKEDKVKLNLQDCVTGDAFSIDVDRWLSRSQDDGDIWRE FAVPQGGKPALPDPFKVLVIIHKKVKLKCCKISKLKCIVTNCLYHGYTFDFHAMSVVHCDYRWLDEKKGDHKCEVDLYPG EEPSESRGEYSIVLKTAEDSSPSCGGRVNMCVYGSKGKSEDITLYAPDPTADLFEPGNIDSFVVNFGNIGEIMKIRLEHD NTNSSPSWHVDWVKLTDIDTNEELVFYINEWFAIDEGDGQITREFSVDKPGDMPLPLTQYVVVVTTSKDSDPMASHGLVS LNLIGQFGDTGMRPLNQSILSDSSPWKPGSEDVFIIEAVSVGKVETIQLQYEGQDTVWCVEKVHVYERLAAISQTVFNCY KAFGTKDQGPVVMEEFKYSDTGFRRIVAVEAKKQHLDPVFFVLFNISYAKKTFSNLDYIAEVPVKVKDNDTKEELQFIYN DLLTCTEDNPDGSVELPAVRPDIAPLQEDEYTFYIATGNRPEAATESDVFCELIGDWGSSGRRLLTQSKNKVPFKRGQVI LTDDDTGEMLTYDFSQWLGEVAGDIRKELPTIKMGQGYKQVIPYYVEVHTSDEEMDSDTYSNIFITLYGLIADTGRRHLV ESRSNKIKFQTGKITSSVLRTIKGKSANIANEAPEQVSSYR |
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