Gene
| Gene Model ID | pfu_aug1.0_6636.1_67492 |
|---|---|
| Locus | scaffold6636.1 : 10126 ... 16011 : + |
| To GenomeBrowser | scaffold6636.1:10126..16011 |
| Genes list of scaffold | scaffold6636.1 |
| Synonym | pfu_aug2.0_1421.1_05036 |
Manual annotation
| Study field | Metabolism |
|---|---|
| Gene name | Pfu-Kazal-type serine proteinase inhibitor 2 like |
| Description | NCBI blastx best hit to ACL36281.1. |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6636.1_67492.t1 | 4 | 1 | Kazal_1 | 19 | 66 | 4.5e-32 | 109.8 | 4.9e-13 | 3.7e-09 | 36.4 |
| pfu_aug1.0_6636.1_67492.t1 | 5 | 1 | Kazal_2 | 26 | 59 | 3.4e-30 | 103.7 | 6.6e-13 | 4.9e-09 | 35.9 |
| pfu_aug1.0_6636.1_67492.t1 | 5 | 2 | Kazal_2 | 73 | 80 | 3.4e-30 | 103.7 | 0.28 | 2100.0 | -1.3 |
| pfu_aug1.0_6636.1_67492.t1 | 4 | 2 | Kazal_1 | 85 | 132 | 4.5e-32 | 109.8 | 1.5e-14 | 1.1e-10 | 41.3 |
| pfu_aug1.0_6636.1_67492.t1 | 5 | 3 | Kazal_2 | 88 | 132 | 3.4e-30 | 103.7 | 4.7e-15 | 3.5e-11 | 42.8 |
| pfu_aug1.0_6636.1_67492.t1 | 4 | 3 | Kazal_1 | 141 | 182 | 4.5e-32 | 109.8 | 3.2e-08 | 0.00024 | 21.0 |
| pfu_aug1.0_6636.1_67492.t1 | 5 | 4 | Kazal_2 | 148 | 198 | 3.4e-30 | 103.7 | 1.1e-05 | 0.078 | 12.9 |
| pfu_aug1.0_6636.1_67492.t1 | 5 | 5 | Kazal_2 | 228 | 254 | 3.4e-30 | 103.7 | 3.5e-11 | 2.6e-07 | 30.4 |
| pfu_aug1.0_6636.1_67492.t1 | 4 | 4 | Kazal_1 | 228 | 257 | 4.5e-32 | 109.8 | 1.3e-10 | 9.6e-07 | 28.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_6636.1_67492.t1 | gi|219809646|gb|ACL36281.1| | Kazal-type serine proteinase inhibitor 2 [Fenneropenaeus chinensis] | 3.0e-16 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-Dshape | 1 |
| >Adult tissues | |
| Dshape | 1 |
Transcript
| Transcript ID | pfu_aug1.0_6636.1_67492.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6636.1_67492.t1 atgatcatacttactattccaacaggtgtggcttacggccagacgataccccagtgtaacaagtattgtttatctcagta caagcccgtatgcggctcagaccaccatacatattcaaacctgtgccagctacaaatagcccaatgtgaggcaaaatata aacaccgtgtactgtaccaggtgggtactggaccatgtcattccaccgggggctctggcagccatggacaaacttatttt gactgcagacaccaggatatctgtgatgacgagcagcttgatccagtctgtggaaacgatggggttacttacagaaaccc ttgcctactccatgaggcagcctgtgctaaagctaagacgggacataagatgatgcaagctcactcaggagagtgtagtg tgtacgaactcggcttggactgcagtcagcaacgctgtggcaacgatctcaaccctgtatgcagcaaaggaaacagcact ttccgcaatttgtgtatgctccgacagatgtactgccgatatgctagtcacggaggatccagtgtgtatgccaaattagc cgagagatatacatttgatcataacgggacatgtgacggcactgatcctacccaaactaccatgatggactgtggtcagt ttgccttgcaaggtgtagctgtagagggtggttcatttagctgtccacattccgacagttcgtcgtacgtctgtggggca gacggacacacatacagctccgtgtgctatctatgcagatccatgaaaatgaaaaacatgctaggaagtactaatgctgt tgagattatacaaaaaggaagatgtccctcatacttggtcggttcttcactcctcatcggttga |
|
Protein
| Protein ID | pfu_aug1.0_6636.1_67492.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6636.1_67492.t1 MIILTIPTGVAYGQTIPQCNKYCLSQYKPVCGSDHHTYSNLCQLQIAQCEAKYKHRVLYQVGTGPCHSTGGSGSHGQTYF DCRHQDICDDEQLDPVCGNDGVTYRNPCLLHEAACAKAKTGHKMMQAHSGECSVYELGLDCSQQRCGNDLNPVCSKGNST FRNLCMLRQMYCRYASHGGSSVYAKLAERYTFDHNGTCDGTDPTQTTMMDCGQFALQGVAVEGGSFSCPHSDSSSYVCGA DGHTYSSVCYLCRSMKMKNMLGSTNAVEIIQKGRCPSYLVGSSLLIG |
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