Gene
| Gene Model ID | pfu_aug1.0_6636.1_67493 |
|---|---|
| Locus | scaffold6636.1 : 29466 ... 45665 : + |
| To GenomeBrowser | scaffold6636.1:29466..45665 |
| Genes list of scaffold | scaffold6636.1 |
| Synonym | pfu_aug2.0_2334.1_15489 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6636.1_67493.t1 | 1 | 1 | MRP-S24 | 32 | 164 | 1.4013e-45 | 154.4 | 0.0 | 1.4013e-45 | 154.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_6636.1_67493.t1 | gi|126697452|gb|ABO26683.1| | mitochondrial ribosomal protein S24 [Haliotis discus discus] | 2.0e-28 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| 8-16cell | 1 |
| >Adult tissues | |
| adductorMuscle | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_6636.1_67493.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6636.1_67493.t1 atgttaactataaaaagcaatttgtgcttcatagagcatttacagaaattgaatacaagatggataaaaacttcttctgt actatgcaaaaatctcagggctggaaaggtcaaagctaacaaaatgagaaaacaaagactgacatatgaaaaagccaata ctccacctacaataggagtccgaaagtcatggttatcttggaatacaagcaacctgaaggatgaggaaaagtcatcacag agagcatttgaagatctgatcatcagaaaattcatcactgggacctgggttggtagacttgaggtcatctcagaggttat tatcaaaagaagatataactgtgtttacatagcttttatagtgaatgaaagcagagaacttttaaatgcaaattactttc ttaaaggatactctgaggaaatgctatccataatattgaagtgccctgtgaaatgtgagataattagagcaacaaatgat gaccttgtttacggcattatatga |
|
Protein
| Protein ID | pfu_aug1.0_6636.1_67493.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6636.1_67493.t1 MLTIKSNLCFIEHLQKLNTRWIKTSSVLCKNLRAGKVKANKMRKQRLTYEKANTPPTIGVRKSWLSWNTSNLKDEEKSSQ RAFEDLIIRKFITGTWVGRLEVISEVIIKRRYNCVYIAFIVNESRELLNANYFLKGYSEEMLSIILKCPVKCEIIRATND DLVYGII |
|