Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_666.1_36634
Locus scaffold666.1 : 16366 ... 22435 : +
To GenomeBrowser scaffold666.1:16366..22435
Genes list of scaffold scaffold666.1
Synonym NA

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_666.1_36634.t1 1 1 COesterase 6 397 0.0 373.3 0.0 0.0 373.1
pfu_aug1.0_666.1_36634.t1 1 1 Abhydrolase_3 99 187 8.6e-08 32.0 1.2e-10 4.4e-07 29.6
pfu_aug1.0_666.1_36634.t1 1 1 Peptidase_S9 117 221 1.1e-06 28.0 4.6e-10 1.7e-06 27.4

Transcript
Transcript IDpfu_aug1.0_666.1_36634.t1
Definition-
>pfu_aug1.0_666.1_36634.t1
atgaagggtataaaagaggaggtagaaggtctttcttcggagtttacatatcagttccgtggaataccctacgccaagcc
accagtgggagaacttagattcaaaaagcctcagtcgttggaacgctggaattacacattagacgccacagtgtttggtc
cctcatgcatgcagactatagatgagacgtttccaatatttgataaccttctgccaaataagaacgtgtcagaggattgc
ttgctcctcaatgtctacgtcccagcctctgtagaacctggcaatatctcagtgatgatatgggtacacggcggagggta
tgtaataggacaaggcatgttctttgatccttcatatatgtctgccaagggaaaggtcatcattgttaccatcaactaca
gactcggtatatttggatttgcttctctacataatggtgatctgaaaggaaactatggtttatgggaccagataatggca
atgaggtgggtgaagaataacatcatggcgttaggcggtgacccagactccataacaatatacggtgagtcagcaggagg
atttagcgttggattacaggcactgattcctgctaataaaggattatttcaaagagtcatagctcagagtggcgtggcaa
actcgatatttgccgtatcaacaatagaaccgaataacactttagctattgggaaagaggtcgggtgtgaaatcaatgat
tatgccgtattgtatgactgtctgatgaacaagtctgccgtcgacattaacactgctgcgagtaacgtctctagtacgat
acccgacacgatacaattatcccgcttcttggcaccagttgtggattatgaactgttttctgatttacccgagaacctaa
taagaaacgaaaaatcaaatgcatcgatatttttcaaatcccttgatatcattattggaaatgtcaacgccgaaggaaca
ctgctttttggagccttgcctcaacaagttcaaactagactgaatttcagccttatggaaggaataccgtatgaagtttt
ctgtgatgacattgttcaatcaatcgcgcgtgactacttctcaaacaatgtaaatgtgaagaatgcgatatgtaaagagt
acggtcataaaaacatgacggaatgcaaggaatggaagcaatcaatatgtatacagatctgttcttcatatctccagcgg
tatcttccctaa

Protein
Protein IDpfu_aug1.0_666.1_36634.t1
Definition-
>pfu_aug1.0_666.1_36634.t1
MKGIKEEVEGLSSEFTYQFRGIPYAKPPVGELRFKKPQSLERWNYTLDATVFGPSCMQTIDETFPIFDNLLPNKNVSEDC
LLLNVYVPASVEPGNISVMIWVHGGGYVIGQGMFFDPSYMSAKGKVIIVTINYRLGIFGFASLHNGDLKGNYGLWDQIMA
MRWVKNNIMALGGDPDSITIYGESAGGFSVGLQALIPANKGLFQRVIAQSGVANSIFAVSTIEPNNTLAIGKEVGCEIND
YAVLYDCLMNKSAVDINTAASNVSSTIPDTIQLSRFLAPVVDYELFSDLPENLIRNEKSNASIFFKSLDIIIGNVNAEGT
LLFGALPQQVQTRLNFSLMEGIPYEVFCDDIVQSIARDYFSNNVNVKNAICKEYGHKNMTECKEWKQSICIQICSSYLQR
YLP

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495