Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_666.1_36635
Locus scaffold666.1 : 26366 ... 33336 : +
To GenomeBrowser scaffold666.1:26366..33336
Genes list of scaffold scaffold666.1
Synonym pfu_aug2.0_139.1_30282

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_666.1_36635.t1 1 1 COesterase 28 523 0.0 441.1 0.0 0.0 440.9
pfu_aug1.0_666.1_36635.t1 1 1 Abhydrolase_3 139 239 1.6e-08 34.4 1.2e-10 3.1e-07 30.2
pfu_aug1.0_666.1_36635.t1 2 1 Peptidase_S9 162 254 5.5e-06 25.7 6.8e-08 0.00017 20.8
pfu_aug1.0_666.1_36635.t1 2 2 Peptidase_S9 300 330 5.5e-06 25.7 0.032 80.0 2.3

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_666.1_36635.t1 gi|291222773|ref|XP_002731389.1| 0.0

Transcript
Transcript IDpfu_aug1.0_666.1_36635.t1
Definition-
>pfu_aug1.0_666.1_36635.t1
atgatccgcaaagttcggattattgatgcacaacacgtcatctttgtatctgaaggtaaaattgaaccgagatgcgagac
ggtatacggcgacgacctgctgaccgtgaccacttcactaggaaatgtaaccggaattggcatcaacgtaaacggacttc
ctggcgccaaaacatatcagtttcggaaaattccgtacgcttctccgccgctcggaaaccttcggttctcaaaaccacaa
ccgtttgggagttggaacgacactctgaatgcaacagtgtttggtccgtcttgtattcaaaatataagtacattatggtc
aaatttactaccgaatactgagatatctgaagattgtctatatctcaacatttatgtaccaaatggaatagacaaaacta
aaaataaaaccgtcatggtatggatacacgggggtggttatgtaaacggccaagggatgttgtatcacgcggattacatg
gccgctaagggtgacgtcataacggtgactatcaactacaggctgaatacatttggatttatgacacttgggaatgatgt
actgaagggaaattatggtctttgggatcaaatagtagcgctacgatgggtgaatgaaaacataaatgcttttgggggtg
atccaaattcagttaccatatttggagaatccgctggtggttttagtgttgcattattggcgctgattccttcaaataaa
ggactatttcacagagtaatagcacagagtggtgtcggaaactcgttttattcactaacaaaaattggtccactaattac
tactttgatagggcgtaatcttcaatgcgatgtcactgtcccttctaccttccctgcttgtcttaggtcaaaatcgacag
aagaaatatttaatgccacggctgctgtttatacacaaccaccgacagttgtacacttgctgattgctcaagctccagtg
gtagacaatgaactattctctgacatgccagaaaatttacttcgtaacacctcatcagaagcgtcaaaattctttagaag
tcttgacgtagttattggaaatgtgaattctgagggctccctcctgaaaggtagtctaccacagcatatacaagacttat
tcaacttcactttcgcagatggtataccgtatcgagtgttctgtggtcagattattcgaacactcatttcagactactat
cacaataaatcaaagattgaacaggctatatgtaaagagtacggagtaaagaataatatacaggaacaggcgcgtcaagc
cattaacatgtacacagacttatttttcctgtcaccaagtgtttcaactctcagatatcatgctctgtctaatagcaata
ccaaacgttttaggtacctatttacgcatggtcacggtccactgagtggatctttcccgccatggttccagggcgcttcc
catgcatcagagctcatgtatttgtttggactcagggatctccctcaactcaacatcagtgtcactactgccgacaagat
cctctcagatgccatggtgacgtattggactaacttcgcaaaatttgggtaa

Protein
Protein IDpfu_aug1.0_666.1_36635.t1
Definition-
>pfu_aug1.0_666.1_36635.t1
MIRKVRIIDAQHVIFVSEGKIEPRCETVYGDDLLTVTTSLGNVTGIGINVNGLPGAKTYQFRKIPYASPPLGNLRFSKPQ
PFGSWNDTLNATVFGPSCIQNISTLWSNLLPNTEISEDCLYLNIYVPNGIDKTKNKTVMVWIHGGGYVNGQGMLYHADYM
AAKGDVITVTINYRLNTFGFMTLGNDVLKGNYGLWDQIVALRWVNENINAFGGDPNSVTIFGESAGGFSVALLALIPSNK
GLFHRVIAQSGVGNSFYSLTKIGPLITTLIGRNLQCDVTVPSTFPACLRSKSTEEIFNATAAVYTQPPTVVHLLIAQAPV
VDNELFSDMPENLLRNTSSEASKFFRSLDVVIGNVNSEGSLLKGSLPQHIQDLFNFTFADGIPYRVFCGQIIRTLISDYY
HNKSKIEQAICKEYGVKNNIQEQARQAINMYTDLFFLSPSVSTLRYHALSNSNTKRFRYLFTHGHGPLSGSFPPWFQGAS
HASELMYLFGLRDLPQLNISVTTADKILSDAMVTYWTNFAKFG

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495