Gene
| Gene Model ID | pfu_aug1.0_666.1_36636 |
|---|---|
| Locus | scaffold666.1 : 33349 ... 46825 : - |
| To GenomeBrowser | scaffold666.1:33349..46825 |
| Genes list of scaffold | scaffold666.1 |
| Synonym | pfu_aug2.0_139.1_30283 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_666.1_36636.t1 | 1 | 1 | GST_N | 3 | 75 | 3.2e-12 | 46.4 | 1.3e-15 | 4.9e-12 | 45.8 |
| pfu_aug1.0_666.1_36636.t1 | 1 | 1 | GST_N_3 | 11 | 79 | 1.6e-11 | 44.2 | 6.8e-15 | 2.5e-11 | 43.6 |
| pfu_aug1.0_666.1_36636.t1 | 1 | 1 | GST_N_2 | 15 | 76 | 4.0e-10 | 39.5 | 1.7e-13 | 6.5e-10 | 38.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_666.1_36636.t1 | gi|260821047|ref|XP_002605845.1| | hypothetical protein BRAFLDRAFT_123804 [Branchiostoma floridae] | 9.99967e-42 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| 8-16cell | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_666.1_36636.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_666.1_36636.t1 atggctttaaaatactattatgacttaatgtcacaaccttgcagggctctttacatcttccttaagatgaataacattcc ttttgaaggcatacaagtcgcacttcgaaacggtgagaacagacaagattggtatacaaagctaaatcccttccagcgtg tgcctactatagatgatggtggatttgtactcactgaaagtatagcgatactaagatacctttccgagaagcacaacatc ccagatcattggttcccgaggaaggacatcgtaacacaggctcggcatgatgagtatctacactggcagcattggaacat cagacttaatggatctatggtctttcaacatttggttgttattccacgtgccactcgtagcactgtagacaggaaacagg tggaaaaattcagtaaggccacaaagtcttcagtaaatcacatcgattcctacttccttaatggtaaaaattacctttgt ggtgaaaaaatatcagtggcagatttattaggtctgtgtgaacttcagncagttaaacgcatgttgcatggagaaactgt acgaagacaatga |
|
Protein
| Protein ID | pfu_aug1.0_666.1_36636.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_666.1_36636.t1 MALKYYYDLMSQPCRALYIFLKMNNIPFEGIQVALRNGENRQDWYTKLNPFQRVPTIDDGGFVLTESIAILRYLSEKHNI PDHWFPRKDIVTQARHDEYLHWQHWNIRLNGSMVFQHLVVIPRATRSTVDRKQVEKFSKATKSSVNHIDSYFLNGKNYLC GEKISVADLLGLCELQXVKRMLHGETVRRQ |
|