Gene
| Gene Model ID | pfu_aug1.0_666.1_36638 |
|---|---|
| Locus | scaffold666.1 : 53970 ... 74965 : - |
| To GenomeBrowser | scaffold666.1:53970..74965 |
| Genes list of scaffold | scaffold666.1 |
| Synonym | pfu_aug2.0_139.1_30285 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_666.1_36638.t1 | 1 | 1 | Arch_ATPase | 296 | 427 | 1.4e-06 | 28.2 | 2.0e-09 | 4.2e-06 | 26.6 |
| pfu_aug1.0_666.1_36638.t1 | 1 | 1 | AAA_16 | 296 | 434 | 4.8e-11 | 42.9 | 1.1e-13 | 2.3e-10 | 40.7 |
| pfu_aug1.0_666.1_36638.t1 | 1 | 1 | AAA_22 | 316 | 430 | 2.8e-06 | 27.4 | 3.4e-09 | 7.3e-06 | 26.1 |
| pfu_aug1.0_666.1_36638.t1 | 2 | 1 | NACHT | 317 | 444 | 1.9e-08 | 34.1 | 9.7e-11 | 2.0e-07 | 30.7 |
| pfu_aug1.0_666.1_36638.t1 | 2 | 2 | NACHT | 841 | 899 | 1.9e-08 | 34.1 | 0.29 | 610.0 | -0.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_666.1_36638.t1 | gi|291229811|ref|XP_002734864.1| | PREDICTED: leucine-rich repeat and WD repeat-containing protein KIAA1239-like, partial [Saccoglossus kowalevskii] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_666.1_36638.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_666.1_36638.t1 atgggatcgtcgtcatcaactcagaataaagccaagtcagccccaccttctggaagacagcaggagaaggtagttgctaa tgggaacagtaaccatgtgaaccagaaacctcctgaaggtcaaggtcaaggacaaaagtcacagcaagcacaaaatactc agaatgacaaacccgttcagaatggtcaaagttccacaacaaagggtcaaggtgctcagagacccgcgactcgatggttt cagagagacaacaacagtgtgcctccaatatacgtcctttcccccatcagtaagttgatcccagatttcctgtctgcaga caaggagaagaagaaagcagccaagcagcagtggtgggacgagggggacattatgcaggaggcgttagaacaggctgctc tcaaagcactgggcgaagagaacgccagaaattatgtcatttcagtaacggagagagaagttcaaatgggaatgcttgaa gcggagaaacctggngtggaatgtatatggataaaaagaaaaataaataacatagagaatattgaatcaagctggcagct ttcaagatatattgagtgtcttggagatgacgagaaatggcagaaaccaagacgactgatggaggaactgagagagaaaa gaatgtctaagattttaccatctgaaaatattctacattatagcgtcaactggacggagaaaggtatcgatccagacttc gccgaacacaaagaatacttagcaaagatgacagagggtttcattgaccttatgtgtagtaaaatcgactctgccatcac agaacattccaaatcccataaggtcgatcctctgtatgaagagtgtatcgaacacacccttttctgcaagacaaaatgtg agaatttctatggacgcgaggatactcttcaaaaaataaaggagtacatatatggtgattcaaacaacactctagttgta catggtttatctggaagtggtaaaacatcgattgtagctaaatgtgctcaacttatcccaacatggctgaaatctggagc agcaattatgatcaggtttattggtacaactccgaacagctctaacatagcatcaatgcttgccagtctcacgaaacaga taaagctggtttatgcacgtgacactaaagttcctgaggagctgaatgagcttgtgcaagaatttcaaaggtgcttggaa tatgcaagtcaaagtcatccattgataatcatattagactcgctagatcaaatagattcttcccataatgcacggcaact gacatggctgccgactcgacttccggcatatgtcaaatttattgtgtccactctagaggaggaggaataccagtgcttcc agaaattgcagaagatccaaaattacacaaatcaggagacgctgactctaaccgggcatctggtctcacttcggaatgtt gttcattccggggttcgcaaccgtttcgatgccaggaatggtttgtcagagtcagagttggaggacatactgtcctgtga tgaggatgtactcaatgacgtgtacatgtactggacacctcctctccgaaggctccctccattactgctcgtccgtctga ggactgacctacagcagtatctaggctcggatcagttcatggttgtcacagacaccactcagcaacatctggctatattc agtttaaaatccagatcatttgttggcgtgggacaagtgatgacgtcagacgcagacggcgagtacatgagtatcgatgc attgacaatatcggccaatgagaaacaagtttacttcactgacagttggaccaatgatatcagaactctagatattgcca aattcaaagaagtctccgtaaagaaaggttcaacggatgattatactctaagttatcacgtgtcatatgacgggaagaag ctgtatttctcctcacacaaggagtttgtcattatggatcttagtagcggcaagaaggagtacctgatttcccacccttg taacatcacggatgtacggactgccgaccttaaaaaagtggtgactataacagaggacacgtgtgtcagggtatgggacg ttactaaacctgtgaaggaaggagatatcctaaagaatatgaagacgttgccgaatccacggtatgtggccatactgttt aagaggtccgagaagcagaacaatccggacttttcttttggagtatatgacatggcgaaaaacagaatcgtccgcgaagc acaactatgtagccaatccggcgatctcatcctagcgaaggtgagtgacggaccaatcatcgtctacgacataatatcaa atacaaaaactgtaattcataccaaaaatctcggagttaaggatttaggggacaaaatgtgtgtatcgtcaagtgatcac agagttgttgttagtggcgaaaaggatgtcgtattctccggagagaagaacagagaacacgttgctttcatttgggattc caagaaaagatgtgtaattgcggaattgttagacaaagaatacttcttcaagtatatgacgaaggagaaccgtaaaggat tgtcgatctcggtcgatgatgtcatgtgtgtgaatggaactgatattgtcagcgcacatgatgactatattatgagggtc tgggatcttatgtcagagctgacggtcgaccttgaccttcaggacgaagctgactatgacgaggacccaggagacataga ttcagactttggtgataccgataaagaagatgaagatgattatgatgaagaagaagatgatgatgacgatgattacacgt aa |
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Protein
| Protein ID | pfu_aug1.0_666.1_36638.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_666.1_36638.t1 MGSSSSTQNKAKSAPPSGRQQEKVVANGNSNHVNQKPPEGQGQGQKSQQAQNTQNDKPVQNGQSSTTKGQGAQRPATRWF QRDNNSVPPIYVLSPISKLIPDFLSADKEKKKAAKQQWWDEGDIMQEALEQAALKALGEENARNYVISVTEREVQMGMLE AEKPXVECIWIKRKINNIENIESSWQLSRYIECLGDDEKWQKPRRLMEELREKRMSKILPSENILHYSVNWTEKGIDPDF AEHKEYLAKMTEGFIDLMCSKIDSAITEHSKSHKVDPLYEECIEHTLFCKTKCENFYGREDTLQKIKEYIYGDSNNTLVV HGLSGSGKTSIVAKCAQLIPTWLKSGAAIMIRFIGTTPNSSNIASMLASLTKQIKLVYARDTKVPEELNELVQEFQRCLE YASQSHPLIIILDSLDQIDSSHNARQLTWLPTRLPAYVKFIVSTLEEEEYQCFQKLQKIQNYTNQETLTLTGHLVSLRNV VHSGVRNRFDARNGLSESELEDILSCDEDVLNDVYMYWTPPLRRLPPLLLVRLRTDLQQYLGSDQFMVVTDTTQQHLAIF SLKSRSFVGVGQVMTSDADGEYMSIDALTISANEKQVYFTDSWTNDIRTLDIAKFKEVSVKKGSTDDYTLSYHVSYDGKK LYFSSHKEFVIMDLSSGKKEYLISHPCNITDVRTADLKKVVTITEDTCVRVWDVTKPVKEGDILKNMKTLPNPRYVAILF KRSEKQNNPDFSFGVYDMAKNRIVREAQLCSQSGDLILAKVSDGPIIVYDIISNTKTVIHTKNLGVKDLGDKMCVSSSDH RVVVSGEKDVVFSGEKNREHVAFIWDSKKRCVIAELLDKEYFFKYMTKENRKGLSISVDDVMCVNGTDIVSAHDDYIMRV WDLMSELTVDLDLQDEADYDEDPGDIDSDFGDTDKEDEDDYDEEEDDDDDDYT |
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