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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_66714.1_41852
Locus scaffold66714.1 : 1 ... 570 : +
To GenomeBrowser scaffold66714.1:1..570
Genes list of scaffold scaffold66714.1
Synonym pfu_aug2.0_476.1_20813

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_66714.1_41852.t1 1 1 Neur_chan_memb 1 101 6.6e-36 124.3 9.79999e-40 7.3e-36 124.2

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
>Adult tissues
adductorMuscle 1

Transcript
Transcript IDpfu_aug1.0_66714.1_41852.t1
Definition-
>pfu_aug1.0_66714.1_41852.t1
gagaaaatcaccttgtccatatctatcctgctagctctcactgtgttctttctactgttgtcagatatcaaccctccgac
gtcattcgtgatacccttaatcggaaagtatcttctttttacaatgatagttgtgactatgtccatatttttggcggttt
atacgctcggaattcactttagaaagccttcaacccataaaatgaacccttgggtgaaacgagtattcactgaaatttta
cctagaatactactaatgaaaaggccagatttggaccggaaacaaaaagtgactttccgaactccaaacggtatagaaat
gagggaggtaggtttaagagacttccacagtagcacagagatgcatctcaatacgagtggcagaaacactccgaacacct
ttgatactatccatagtaatccacaaggaacacctactggatatgacgaaatcacgagtacccaaaggaagtccgagaag
ccatcgagggagtga

Protein
Protein IDpfu_aug1.0_66714.1_41852.t1
Definition-
>pfu_aug1.0_66714.1_41852.t1
EKITLSISILLALTVFFLLLSDINPPTSFVIPLIGKYLLFTMIVVTMSIFLAVYTLGIHFRKPSTHKMNPWVKRVFTEIL
PRILLMKRPDLDRKQKVTFRTPNGIEMREVGLRDFHSSTEMHLNTSGRNTPNTFDTIHSNPQGTPTGYDEITSTQRKSEK
PSRE

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