Gene
| Gene Model ID | pfu_aug1.0_6687.1_45498 |
|---|---|
| Locus | scaffold6687.1 : 366 ... 21376 : - |
| To GenomeBrowser | scaffold6687.1:366..21376 |
| Genes list of scaffold | scaffold6687.1 |
| Synonym | pfu_aug2.0_364.1_14054 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6687.1_45498.t1 | 1 | 1 | Mur_ligase_M | 56 | 204 | 1.4e-06 | 28.4 | 3.0e-10 | 4.5e-06 | 26.8 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| egg-4cell | 2 |
| 8-16cell | 1 |
| >Adult tissues | |
| adductorMuscle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_6687.1_45498.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6687.1_45498.t1 gaggcagtgaaaaccctgaacactttacagagtaacgcacagaccatagagaaaatgaggaaggaaagggataaaaagtc acatctcaatattcctaaaatgatcaagtacgcacagagaactggcataacattagacgatatagacaatctaaatgtga tacatgtaagtggaaccaaaggtaaaggatcaacatgtgctttctgtgaaagcattctacgtcaccatggatacaaaacg ggattctttagttctccacatttggtagaagtgagggagagatttaggataaatggacaaccaatctcccgatccatgtt tgctgattatttttgggaggtttacagtaaactgatcggtagcaaggacactgaggacagtggtggtatgccggcatatt ttgcatttttgacggtgatggccttcaacatgttcaagcaggaaaaggtagacgtggccattatagaggtcggaatcggg ggccagtacgatagtaccaacctcatacgtaaacctgttgtgtgtggcgtcacatctctgggcctcgatcatgtgtccat tctaggagaaactgtagagaaaatagcctggcacaaagctggtatattcaagcctggagtgcctgctttttcctcccctc agcaggagggtgccatgaaggtactgcaggacagagccaatgaaattgggaaccgccttgatgtggtatcaccccttgct gagcgtgaccaggatggtaataagctacggctcggtatatgtggccatgtacagcagcataacgctgctcttgctgtaca gctttgtaaaacattcatgaggaccagacgaaaaagcacgacacaagaagaatcagaaactgaccaaactaaaaacaaag acttaagtcaagatagcgatctggaatcattacatacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnntcttggtttgataataaaattttgctgcttcatgttagtaaatcactcaatgtcatcattggcggctgatc tccctgtcctttcacattataatgtgtccctgctaatagaatga |
|
Protein
| Protein ID | pfu_aug1.0_6687.1_45498.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6687.1_45498.t1 EAVKTLNTLQSNAQTIEKMRKERDKKSHLNIPKMIKYAQRTGITLDDIDNLNVIHVSGTKGKGSTCAFCESILRHHGYKT GFFSSPHLVEVRERFRINGQPISRSMFADYFWEVYSKLIGSKDTEDSGGMPAYFAFLTVMAFNMFKQEKVDVAIIEVGIG GQYDSTNLIRKPVVCGVTSLGLDHVSILGETVEKIAWHKAGIFKPGVPAFSSPQQEGAMKVLQDRANEIGNRLDVVSPLA ERDQDGNKLRLGICGHVQQHNAALAVQLCKTFMRTRRKSTTQEESETDQTKNKDLSQDSDLESLHXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGLIIKFCCFMLVNHSMSSLAADLPVLSHYNVSLLIE |
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