Gene
| Gene Model ID | pfu_aug1.0_67.1_36268 |
|---|---|
| Locus | scaffold67.1 : 90295 ... 96095 : - |
| To GenomeBrowser | scaffold67.1:90295..96095 |
| Genes list of scaffold | scaffold67.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_67.1_36268.t1 | 3 | 1 | DUF4201 | 164 | 212 | 5.1e-26 | 91.1 | 1.0 | 15000.0 | -9.8 |
| pfu_aug1.0_67.1_36268.t1 | 3 | 2 | DUF4201 | 188 | 288 | 5.1e-26 | 91.1 | 1.0 | 15000.0 | -9.9 |
| pfu_aug1.0_67.1_36268.t1 | 3 | 3 | DUF4201 | 317 | 457 | 5.1e-26 | 91.1 | 3.4e-30 | 5.1e-26 | 91.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_67.1_36268.t1 | gi|291226619|ref|XP_002733290.1| | PREDICTED: coiled-coil domain-containing protein 96-like [Saccoglossus kowalevskii] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-Dshape | 1 |
| >Adult tissues | |
| Dshape | 1 |
| maleGonad | 1 |
| mantle | 1 |
| mantlePallium | 1 |
Transcript
| Transcript ID | pfu_aug1.0_67.1_36268.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_67.1_36268.t1 atgattaaattagttgaccatctcatggaagttgaaggtgaaggagatgaaaagccaggtgaggaagagcagaaaccaga gggtgagggtggagaggaaacagctgcccctgccgagggtcaggaggaaggaggagaaaaaccagaaggggagggggaag aaaaacctgaaggggagggagaacagaaagcagaaggggatggagaggaaaaagcagagggcgaggaagctgccaaagtt gagggagaagaaggttctaaatctcctgtcccccagagtgacacatttgcagagggagaacgtgcagagagtccaggtat tgtgggtgaaaaactttccagagagggaagtccagccttacaggaaggcgagaagttggctgaagtgcctgaacccatag agcctggtacacctgaaaggtcaaggccaggctcagctgatcagaaagaggagcagcatttagcaacatttgaagaagag gaagaagaagaagaggaggaggaagaagaagaggaggaagagcaacctcagtatgacagagatgctcttatagaaaaata tcatgcccttattgctgctagagaacagcttcaacaacagaattaccaactccaacacaaactggctgagcattttagga agaagaaggctgacgatgctcgtcaagattacgataaaaacgccaatgaccaggattcaaaatatgtcaaatacatggcc caagtggaagatatgaggagacaggatgcagaagaaagactgaattatcagaatataatggaagatctacgtctgaaatg tgaggagaggaaggaaagagtggacgaagagaggaaaaagttcatggagttcaaaaaacaagtggctctaaactctatat caaatagatcagggaaagctataccaccaaaggatattgagcagattttgagtgcagagaacaaaaaggagcaagatgta gtacaagtacgactagaaaatatcaaactgaagaataaattaaagaagaaagagcaccagctcaaatcaaaggaactcct taaattacgaaaaaagattacaagtacagtacaagtgctgactcatctcaaagagaaacttcagtttgttcaagcggaga accaagttcaaaaagctcgtcttcgagaagtggaatcagaggctgcacagaaacgtgatattctctccagaacaaaacag gcaagagatgccctcagaatagacaatcataagttacgacagaattgtggtttacttggtaatgcaccgttactacgtga ttttgaagaaagaaaagatgaaggagacgatttacgttcaagacttgagcgattgaaaatgcaccatgcagaactgacct tgaactgcaatcaagtgcggcgaaaaattgagcaagctcgtcagaatagaggctaa |
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Protein
| Protein ID | pfu_aug1.0_67.1_36268.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_67.1_36268.t1 MIKLVDHLMEVEGEGDEKPGEEEQKPEGEGGEETAAPAEGQEEGGEKPEGEGEEKPEGEGEQKAEGDGEEKAEGEEAAKV EGEEGSKSPVPQSDTFAEGERAESPGIVGEKLSREGSPALQEGEKLAEVPEPIEPGTPERSRPGSADQKEEQHLATFEEE EEEEEEEEEEEEEEQPQYDRDALIEKYHALIAAREQLQQQNYQLQHKLAEHFRKKKADDARQDYDKNANDQDSKYVKYMA QVEDMRRQDAEERLNYQNIMEDLRLKCEERKERVDEERKKFMEFKKQVALNSISNRSGKAIPPKDIEQILSAENKKEQDV VQVRLENIKLKNKLKKKEHQLKSKELLKLRKKITSTVQVLTHLKEKLQFVQAENQVQKARLREVESEAAQKRDILSRTKQ ARDALRIDNHKLRQNCGLLGNAPLLRDFEERKDEGDDLRSRLERLKMHHAELTLNCNQVRRKIEQARQNRG |
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