Gene
| Gene Model ID | pfu_aug1.0_670.1_43781 |
|---|---|
| Locus | scaffold670.1 : 1 ... 9355 : - |
| To GenomeBrowser | scaffold670.1:1..9355 |
| Genes list of scaffold | scaffold670.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_670.1_43781.t1 | 1 | 1 | DnaJ | 2 | 24 | 9.4e-07 | 28.4 | 4.1e-10 | 2.0e-06 | 27.4 |
| pfu_aug1.0_670.1_43781.t1 | 1 | 1 | CTDII | 70 | 140 | 1.6e-10 | 40.7 | 6.4e-14 | 3.2e-10 | 39.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_670.1_43781.t1 | gi|351711762|gb|EHB14681.1| | DnaJ-like protein subfamily A member 1 [Heterocephalus glaber] | 8.00141e-43 |
Transcript
| Transcript ID | pfu_aug1.0_670.1_43781.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_670.1_43781.t1 atgtacaagttcaagctaataagccatgcatatgagacgctgtccgatcccaagaaaagagaaatttatgacaaaggtgg agaggaagccatcaaaggaggaggttctaacactgaattccataatccattcgacatattcaatatgttctttggaacag gaggctcaagaaagcagagttcaagaaaagtaaagagtgtcgtacatcaacttagtgttagccttgaagatctgtacaat ggaacgacaagaaagctagctgtgaagaaaaatgttatctgctcaaaatgtgatggtgaagtgataaaagacaatgaaat aaaatgcataatgaacgaaggcatgccaactcacagaaatccatttgaaaaagggaggctcatcatacactttcaagtga aatttccggaaactttggcactcgataaagtaaaagccatagagaaactgttgcctgcacgacctgaaggtatgattccg gacgatgctgaggaacacgaccttgtggaatatgaccccagcgagaggaaacatcgaggtcatcaagatgcttacatgga ggacgatgatgagggtcattttggaccccacggacagagagtccagtgcgcaaatcaatga |
|
Protein
| Protein ID | pfu_aug1.0_670.1_43781.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_670.1_43781.t1 MYKFKLISHAYETLSDPKKREIYDKGGEEAIKGGGSNTEFHNPFDIFNMFFGTGGSRKQSSRKVKSVVHQLSVSLEDLYN GTTRKLAVKKNVICSKCDGEVIKDNEIKCIMNEGMPTHRNPFEKGRLIIHFQVKFPETLALDKVKAIEKLLPARPEGMIP DDAEEHDLVEYDPSERKHRGHQDAYMEDDDEGHFGPHGQRVQCANQ |
|